BLASTX nr result

ID: Scutellaria24_contig00000956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000956
         (1168 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277280.1| PREDICTED: chlorophyll a-b binding protein, ...   433   e-119
emb|CAN69989.1| hypothetical protein VITISV_024400 [Vitis vinifera]   433   e-119
ref|XP_002516245.1| chlorophyll A/B binding protein, putative [R...   430   e-118
ref|XP_003546513.1| PREDICTED: chlorophyll a-b binding protein, ...   417   e-114
ref|XP_002326295.1| light-harvesting complex I protein Lhca6 [Po...   417   e-114

>ref|XP_002277280.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic [Vitis
           vinifera] gi|297738533|emb|CBI27778.3| unnamed protein
           product [Vitis vinifera]
          Length = 259

 Score =  433 bits (1114), Expect = e-119
 Identities = 196/222 (88%), Positives = 211/222 (95%)
 Frame = -2

Query: 921 MKATKGPSSVCKPLPPDRPLWFPGSSPPPWLDGSLPGDFGFDPLGLGSDPELLRWFAQAE 742
           + ATKG SSVC+PLPPDRPLWFPGSSPP WLDGSLPGDFGFDPLGLGSDPELLRWFAQAE
Sbjct: 37  LNATKGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLRWFAQAE 96

Query: 741 LMHARWAMLAVSGILIPEWLEGLGFIENFSWYDAGAREYFTDPTTLFVVQLALMGWVEGR 562
           LMH+RWAMLAV+GILIPE LE LGFIENFSWYDAGA+E+F DPTTLFVVQLALMGWVEGR
Sbjct: 97  LMHSRWAMLAVAGILIPECLERLGFIENFSWYDAGAQEFFADPTTLFVVQLALMGWVEGR 156

Query: 561 RWADIVNPGCVDIEPNFPNRKKPKPDVGYPGGLFFDPMMWGRGSPEPVMTLRTKEIKNGR 382
           RWAD++NPGCVDI+  FPN+ KPKPDVGYPGGL+FDP MWGRGSPEPVM LRTKEIKNGR
Sbjct: 157 RWADLINPGCVDIQLTFPNKAKPKPDVGYPGGLWFDPFMWGRGSPEPVMVLRTKEIKNGR 216

Query: 381 LAMLAFLGFCFQALYTGQGPIENLMAHIADPGHCNIFSAFTS 256
           LAMLAF+GFCFQA+YTG+GPIENLMAHIADPGHCN+FSAFTS
Sbjct: 217 LAMLAFVGFCFQAIYTGEGPIENLMAHIADPGHCNVFSAFTS 258


>emb|CAN69989.1| hypothetical protein VITISV_024400 [Vitis vinifera]
          Length = 229

 Score =  433 bits (1114), Expect = e-119
 Identities = 196/222 (88%), Positives = 211/222 (95%)
 Frame = -2

Query: 921 MKATKGPSSVCKPLPPDRPLWFPGSSPPPWLDGSLPGDFGFDPLGLGSDPELLRWFAQAE 742
           + ATKG SSVC+PLPPDRPLWFPGSSPP WLDGSLPGDFGFDPLGLGSDPELLRWFAQAE
Sbjct: 7   LNATKGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLRWFAQAE 66

Query: 741 LMHARWAMLAVSGILIPEWLEGLGFIENFSWYDAGAREYFTDPTTLFVVQLALMGWVEGR 562
           LMH+RWAMLAV+GILIPE LE LGFIENFSWYDAGA+E+F DPTTLFVVQLALMGWVEGR
Sbjct: 67  LMHSRWAMLAVAGILIPECLERLGFIENFSWYDAGAQEFFADPTTLFVVQLALMGWVEGR 126

Query: 561 RWADIVNPGCVDIEPNFPNRKKPKPDVGYPGGLFFDPMMWGRGSPEPVMTLRTKEIKNGR 382
           RWAD++NPGCVDI+  FPN+ KPKPDVGYPGGL+FDP MWGRGSPEPVM LRTKEIKNGR
Sbjct: 127 RWADLINPGCVDIQLTFPNKAKPKPDVGYPGGLWFDPFMWGRGSPEPVMVLRTKEIKNGR 186

Query: 381 LAMLAFLGFCFQALYTGQGPIENLMAHIADPGHCNIFSAFTS 256
           LAMLAF+GFCFQA+YTG+GPIENLMAHIADPGHCN+FSAFTS
Sbjct: 187 LAMLAFVGFCFQAIYTGEGPIENLMAHIADPGHCNVFSAFTS 228


>ref|XP_002516245.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223544731|gb|EEF46247.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 297

 Score =  430 bits (1106), Expect = e-118
 Identities = 193/223 (86%), Positives = 211/223 (94%), Gaps = 1/223 (0%)
 Frame = -2

Query: 921 MKATKGP-SSVCKPLPPDRPLWFPGSSPPPWLDGSLPGDFGFDPLGLGSDPELLRWFAQA 745
           + ATKG  S+VC+PLPPDRPLWFPGSSPP WLDGSLPGDFGFDPLGLGSDPELL+WFAQA
Sbjct: 74  LNATKGGVSTVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQA 133

Query: 744 ELMHARWAMLAVSGILIPEWLEGLGFIENFSWYDAGAREYFTDPTTLFVVQLALMGWVEG 565
           ELMH+RWAMLAV+GILIPEWLE LGFIEN++W+DAGAREYF DPTTLF+VQL LMGWVEG
Sbjct: 134 ELMHSRWAMLAVAGILIPEWLESLGFIENYNWFDAGAREYFADPTTLFIVQLVLMGWVEG 193

Query: 564 RRWADIVNPGCVDIEPNFPNRKKPKPDVGYPGGLFFDPMMWGRGSPEPVMTLRTKEIKNG 385
           RRWAD++ PGCVDIEP  PN+ KPKPDVGYPGGL+FDP+MWGRGSPEPVM LRTKEIKNG
Sbjct: 194 RRWADMIKPGCVDIEPTLPNKTKPKPDVGYPGGLWFDPLMWGRGSPEPVMVLRTKEIKNG 253

Query: 384 RLAMLAFLGFCFQALYTGQGPIENLMAHIADPGHCNIFSAFTS 256
           RLAMLAF+GFCFQA+YTG+GPIENLMAHIADPGHCNIFSAFTS
Sbjct: 254 RLAMLAFVGFCFQAVYTGEGPIENLMAHIADPGHCNIFSAFTS 296


>ref|XP_003546513.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Glycine max]
          Length = 260

 Score =  417 bits (1073), Expect = e-114
 Identities = 191/222 (86%), Positives = 205/222 (92%)
 Frame = -2

Query: 924 VMKATKGPSSVCKPLPPDRPLWFPGSSPPPWLDGSLPGDFGFDPLGLGSDPELLRWFAQA 745
           V  ATKG S+VC+PLPPDRPLWFPGSSPP WLDGSLPGDFGFDPLGLGSDPELL+WFAQA
Sbjct: 38  VAYATKGVSAVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQA 97

Query: 744 ELMHARWAMLAVSGILIPEWLEGLGFIENFSWYDAGAREYFTDPTTLFVVQLALMGWVEG 565
           ELMHARWAMLAV GIL+PE LE +G+IENFSWYDAGAREYF DPTTLFVVQ+ LMGWVEG
Sbjct: 98  ELMHARWAMLAVFGILVPELLEKIGYIENFSWYDAGAREYFVDPTTLFVVQMGLMGWVEG 157

Query: 564 RRWADIVNPGCVDIEPNFPNRKKPKPDVGYPGGLFFDPMMWGRGSPEPVMTLRTKEIKNG 385
           RRWAD+VNPG VDIEP  P+   PKPDVGYPGGL+FDPMMWGRGSPEPVM LRTKEIKNG
Sbjct: 158 RRWADMVNPGSVDIEPKVPHITNPKPDVGYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNG 217

Query: 384 RLAMLAFLGFCFQALYTGQGPIENLMAHIADPGHCNIFSAFT 259
           RLAMLAF+GF FQA+YTG+GPIENLMAH+ADPGHCNIFSAFT
Sbjct: 218 RLAMLAFVGFWFQAIYTGEGPIENLMAHLADPGHCNIFSAFT 259


>ref|XP_002326295.1| light-harvesting complex I protein Lhca6 [Populus trichocarpa]
           gi|222833488|gb|EEE71965.1| light-harvesting complex I
           protein Lhca6 [Populus trichocarpa]
          Length = 261

 Score =  417 bits (1073), Expect = e-114
 Identities = 185/223 (82%), Positives = 205/223 (91%)
 Frame = -2

Query: 921 MKATKGPSSVCKPLPPDRPLWFPGSSPPPWLDGSLPGDFGFDPLGLGSDPELLRWFAQAE 742
           + ATKG SSVC+PLPPDRPLWFPGSSPP WLDGSLPGDFGFDPLGLGSDPE L+WFAQAE
Sbjct: 39  VNATKGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPESLKWFAQAE 98

Query: 741 LMHARWAMLAVSGILIPEWLEGLGFIENFSWYDAGAREYFTDPTTLFVVQLALMGWVEGR 562
           L+H RWAMLA +GILIPEWLE LGFI+NF+W+DAG REYF DPTTLFVVQL LMGW+EGR
Sbjct: 99  LIHGRWAMLAAAGILIPEWLERLGFIDNFNWFDAGTREYFADPTTLFVVQLILMGWIEGR 158

Query: 561 RWADIVNPGCVDIEPNFPNRKKPKPDVGYPGGLFFDPMMWGRGSPEPVMTLRTKEIKNGR 382
           RWAD++ PGCVDI+P  P++ KPKPDVGYPGGL+FDP  WGRGSPEPVM +RTKEIKNGR
Sbjct: 159 RWADMIKPGCVDIDPKLPHKTKPKPDVGYPGGLWFDPWNWGRGSPEPVMAIRTKEIKNGR 218

Query: 381 LAMLAFLGFCFQALYTGQGPIENLMAHIADPGHCNIFSAFTSH 253
           LAMLAF+GF FQA+YTG+GPI+NLMAHIADPGHCNIFSAFTSH
Sbjct: 219 LAMLAFVGFWFQAIYTGEGPIDNLMAHIADPGHCNIFSAFTSH 261


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