BLASTX nr result

ID: Scutellaria24_contig00000864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000864
         (780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516025.1| Photosystem I reaction center subunit VI, ch...   227   2e-57
ref|XP_002304206.1| hypothetical protein POPTRDRAFT_712066 [Popu...   224   2e-56
emb|CAA43841.1| photosystem I psaH protein [Nicotiana sylvestris]     222   6e-56
dbj|BAA04633.1| PSI-H precursor [Nicotiana sylvestris]                221   1e-55
dbj|BAA04634.1| PSI-H precursor [Nicotiana sylvestris]                220   3e-55

>ref|XP_002516025.1| Photosystem I reaction center subunit VI, chloroplast precursor,
           putative [Ricinus communis] gi|223544930|gb|EEF46445.1|
           Photosystem I reaction center subunit VI, chloroplast
           precursor, putative [Ricinus communis]
          Length = 144

 Score =  227 bits (579), Expect = 2e-57
 Identities = 114/144 (79%), Positives = 121/144 (84%)
 Frame = -2

Query: 686 MASLATFAAVQPTAVKGLAGSSLAGTKLHVKPSRLSFKPTNYRSGAVVAKYGEKSVYFDL 507
           MASLATFAAVQP  VKGL GSSL GTKLHVKPSR S +P N R+GAV AKYG+KSVYFDL
Sbjct: 1   MASLATFAAVQPATVKGLGGSSLTGTKLHVKPSRQSLRPKNRRNGAVEAKYGDKSVYFDL 60

Query: 506 EDIGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRXXXXXXXXXXXGATLAYVSSQ 327
           ED+GNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKR           G+TLAY+S+ 
Sbjct: 61  EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYLSAT 120

Query: 326 ATGDVLPIVKGPQLPPKLGPRGKI 255
           ATGDVLPI KGPQLPPKLGPRGKI
Sbjct: 121 ATGDVLPIKKGPQLPPKLGPRGKI 144


>ref|XP_002304206.1| hypothetical protein POPTRDRAFT_712066 [Populus trichocarpa]
           gi|118487059|gb|ABK95360.1| unknown [Populus
           trichocarpa] gi|222841638|gb|EEE79185.1| hypothetical
           protein POPTRDRAFT_712066 [Populus trichocarpa]
          Length = 144

 Score =  224 bits (571), Expect = 2e-56
 Identities = 110/144 (76%), Positives = 121/144 (84%)
 Frame = -2

Query: 686 MASLATFAAVQPTAVKGLAGSSLAGTKLHVKPSRLSFKPTNYRSGAVVAKYGEKSVYFDL 507
           MASLATFAAVQP  +KGL GSSL+GTKLHVKPSR   +P + RSGAVVAKYG+KSVYFDL
Sbjct: 1   MASLATFAAVQPATIKGLGGSSLSGTKLHVKPSRQGLRPKSLRSGAVVAKYGDKSVYFDL 60

Query: 506 EDIGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRXXXXXXXXXXXGATLAYVSSQ 327
           ED+GNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKR           G+TLAY S+ 
Sbjct: 61  EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120

Query: 326 ATGDVLPIVKGPQLPPKLGPRGKI 255
           A+GD+LPI KGPQLPPKLGPRGK+
Sbjct: 121 ASGDILPIKKGPQLPPKLGPRGKL 144


>emb|CAA43841.1| photosystem I psaH protein [Nicotiana sylvestris]
          Length = 145

 Score =  222 bits (566), Expect = 6e-56
 Identities = 113/145 (77%), Positives = 122/145 (84%), Gaps = 1/145 (0%)
 Frame = -2

Query: 686 MASLATFAAVQPTA-VKGLAGSSLAGTKLHVKPSRLSFKPTNYRSGAVVAKYGEKSVYFD 510
           MASLA FAAVQPT  VKGLAGSS+ GTKLH+K SRL+ KPT  R+G VVAKYG+KSVYFD
Sbjct: 1   MASLAAFAAVQPTTNVKGLAGSSITGTKLHLKSSRLNLKPTKSRAGPVVAKYGDKSVYFD 60

Query: 509 LEDIGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRXXXXXXXXXXXGATLAYVSS 330
           LED+GNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKR           G+TLAY SS
Sbjct: 61  LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSS 120

Query: 329 QATGDVLPIVKGPQLPPKLGPRGKI 255
            A+GD+LPI KGPQLPPKLGPRGKI
Sbjct: 121 TASGDILPIKKGPQLPPKLGPRGKI 145


>dbj|BAA04633.1| PSI-H precursor [Nicotiana sylvestris]
          Length = 145

 Score =  221 bits (564), Expect = 1e-55
 Identities = 112/145 (77%), Positives = 122/145 (84%), Gaps = 1/145 (0%)
 Frame = -2

Query: 686 MASLATFAAVQPTA-VKGLAGSSLAGTKLHVKPSRLSFKPTNYRSGAVVAKYGEKSVYFD 510
           MASLAT   VQPT  +KGLAGSS+AGTKLHVK SRL+ KP+  R+GAVVAKYG+KSVYFD
Sbjct: 1   MASLATLTVVQPTTTIKGLAGSSIAGTKLHVKSSRLNLKPSKSRAGAVVAKYGDKSVYFD 60

Query: 509 LEDIGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRXXXXXXXXXXXGATLAYVSS 330
           LED+GNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKR           G+TLAY SS
Sbjct: 61  LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSS 120

Query: 329 QATGDVLPIVKGPQLPPKLGPRGKI 255
            A+GD+LPI KGPQLPPKLGPRGKI
Sbjct: 121 TASGDILPIKKGPQLPPKLGPRGKI 145


>dbj|BAA04634.1| PSI-H precursor [Nicotiana sylvestris]
          Length = 145

 Score =  220 bits (560), Expect = 3e-55
 Identities = 113/145 (77%), Positives = 122/145 (84%), Gaps = 1/145 (0%)
 Frame = -2

Query: 686 MASLATFAAVQPT-AVKGLAGSSLAGTKLHVKPSRLSFKPTNYRSGAVVAKYGEKSVYFD 510
           MASLAT AAVQPT AV GLAGSS+ GTKLHVK SRL+ K T  R+G+VVAKYG+KSVYFD
Sbjct: 1   MASLATLAAVQPTTAVNGLAGSSIIGTKLHVKSSRLNLKSTKSRAGSVVAKYGDKSVYFD 60

Query: 509 LEDIGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRXXXXXXXXXXXGATLAYVSS 330
           LED+GNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKR           G+TLAY SS
Sbjct: 61  LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSS 120

Query: 329 QATGDVLPIVKGPQLPPKLGPRGKI 255
            A+GD+LPI KGPQLPPKLGPRGKI
Sbjct: 121 TASGDILPIKKGPQLPPKLGPRGKI 145


Top