BLASTX nr result

ID: Scutellaria24_contig00000852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000852
         (867 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA96366.1| cytoplasmic ribosomal protein S13 [Panax ginseng]     295   7e-78
ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis ...   294   2e-77
ref|XP_002875045.1| ATRPS13A [Arabidopsis lyrata subsp. lyrata] ...   293   3e-77
ref|XP_002511695.1| 40S ribosomal protein S13, putative [Ricinus...   293   3e-77
ref|XP_004147941.1| PREDICTED: 40S ribosomal protein S13-like [C...   293   3e-77

>dbj|BAA96366.1| cytoplasmic ribosomal protein S13 [Panax ginseng]
          Length = 151

 Score =  295 bits (756), Expect = 7e-78
 Identities = 147/151 (97%), Positives = 149/151 (98%)
 Frame = +1

Query: 58  MGRMHSRGKGISASALPYKRTPPSWLKTTTQDVEENICKFAKKGLTPSQIGVILRDSHGI 237
           MGRMHSRGKGISASALPYKRTPPSWLK T QDV++NICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKITPQDVDDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 238 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 417
           AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 418 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 510
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis vinifera]
           gi|147820740|emb|CAN69640.1| hypothetical protein
           VITISV_028568 [Vitis vinifera]
           gi|296089171|emb|CBI38874.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score =  294 bits (752), Expect = 2e-77
 Identities = 145/151 (96%), Positives = 150/151 (99%)
 Frame = +1

Query: 58  MGRMHSRGKGISASALPYKRTPPSWLKTTTQDVEENICKFAKKGLTPSQIGVILRDSHGI 237
           MGRMHSRGKGIS+SALPYKRTPPSWLK ++QDVEENICKFAKKG+TPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGMTPSQIGVILRDSHGI 60

Query: 238 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 417
           AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 418 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 510
           RIHRLARYYK+TKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKRTKKLPPVWKYESTTASTLVA 151


>ref|XP_002875045.1| ATRPS13A [Arabidopsis lyrata subsp. lyrata]
           gi|297320882|gb|EFH51304.1| ATRPS13A [Arabidopsis lyrata
           subsp. lyrata]
          Length = 151

 Score =  293 bits (751), Expect = 3e-77
 Identities = 146/151 (96%), Positives = 149/151 (98%)
 Frame = +1

Query: 58  MGRMHSRGKGISASALPYKRTPPSWLKTTTQDVEENICKFAKKGLTPSQIGVILRDSHGI 237
           MGRMHSRGKGISASALPYKR PPSWLKTT+QDV+E+ICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRPPPSWLKTTSQDVDESICKFAKKGLTPSQIGVILRDSHGI 60

Query: 238 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 417
            QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  PQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 418 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 510
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>ref|XP_002511695.1| 40S ribosomal protein S13, putative [Ricinus communis]
           gi|223548875|gb|EEF50364.1| 40S ribosomal protein S13,
           putative [Ricinus communis]
          Length = 151

 Score =  293 bits (751), Expect = 3e-77
 Identities = 146/151 (96%), Positives = 149/151 (98%)
 Frame = +1

Query: 58  MGRMHSRGKGISASALPYKRTPPSWLKTTTQDVEENICKFAKKGLTPSQIGVILRDSHGI 237
           MGRMHSRGKGISASALPYKRTPPSWLK ++QDV+ENICKFAKKGL PSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVDENICKFAKKGLRPSQIGVILRDSHGI 60

Query: 238 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 417
           AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 418 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 510
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>ref|XP_004147941.1| PREDICTED: 40S ribosomal protein S13-like [Cucumis sativus]
           gi|449494323|ref|XP_004159513.1| PREDICTED: 40S
           ribosomal protein S13-like [Cucumis sativus]
          Length = 151

 Score =  293 bits (750), Expect = 3e-77
 Identities = 146/151 (96%), Positives = 149/151 (98%)
 Frame = +1

Query: 58  MGRMHSRGKGISASALPYKRTPPSWLKTTTQDVEENICKFAKKGLTPSQIGVILRDSHGI 237
           MGRMHSRGKGISASALPYKRTPPSWLK +TQDVEENICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 238 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 417
           AQVKSVTG+KILRILKA GLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGNKILRILKAQGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 418 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 510
           RIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


Top