BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000796
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop...   107   1e-21
sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B,...   105   4e-21
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,...   104   9e-21
sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, c...   103   1e-20
ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   103   1e-20

>ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus] gi|449483348|ref|XP_004156563.1| PREDICTED: 29
           kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 278

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/61 (83%), Positives = 54/61 (88%)
 Frame = -3

Query: 199 VIYDKTTGRSRGFGFVTMSTAKEVQAAAQQFDGYELQGRALRVNSGPPPPKREDSPFRGG 20
           VIYDKTTGRSRGFGFVTMST  EV+AAAQQF+GYEL GR LRVN GPPPPKR+DS FRG 
Sbjct: 124 VIYDKTTGRSRGFGFVTMSTVGEVEAAAQQFNGYELDGRLLRVNYGPPPPKRDDSSFRGS 183

Query: 19  R 17
           R
Sbjct: 184 R 184



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/54 (50%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
 Frame = -3

Query: 199 VIYDKTTGRSRGFGFVTMSTAKEVQAAAQQFDGYELQGRALRVNSGPP-PPKRE 41
           V+YD+ +G+SRGFGFVT ++A+EV  A Q  DG +L GR +RV      PP+R+
Sbjct: 224 VVYDRDSGKSRGFGFVTYNSAEEVNEAIQSLDGVDLDGRPIRVTQAEARPPRRQ 277


>sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName:
           Full=CP29B; Flags: Precursor gi|14135|emb|CAA43428.1|
           29kD B ribonucleoprotein [Nicotiana sylvestris]
          Length = 291

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/66 (75%), Positives = 57/66 (86%)
 Frame = -3

Query: 199 VIYDKTTGRSRGFGFVTMSTAKEVQAAAQQFDGYELQGRALRVNSGPPPPKREDSPFRGG 20
           VIYDK TGRSRGFGFVTMST +EV+AA QQF+GYE+ GRA+RVN+GP P KRE+S F GG
Sbjct: 118 VIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGG 177

Query: 19  RGDNSS 2
           RG NSS
Sbjct: 178 RGGNSS 183



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/53 (49%), Positives = 39/53 (73%)
 Frame = -3

Query: 199 VIYDKTTGRSRGFGFVTMSTAKEVQAAAQQFDGYELQGRALRVNSGPPPPKRE 41
           V+YD+ +GRSRGFGFVT S++KEV  A    +G +L GR++RV++    P+R+
Sbjct: 238 VVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEERPRRQ 290


>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
           Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
           29kD A ribonucleoprotein [Nicotiana sylvestris]
          Length = 273

 Score =  104 bits (259), Expect = 9e-21
 Identities = 52/66 (78%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
 Frame = -3

Query: 199 VIYDKTTGRSRGFGFVTMSTAKEVQAAAQQFDGYELQGRALRVNSGPPPPKREDSPFRGG 20
           VIYDK TGRSRGFGFVTMS+ +EV+AA QQF+GYEL GRALRVNSGPPP KRE+S FRGG
Sbjct: 118 VIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGG 177

Query: 19  -RGDNS 5
            RG  S
Sbjct: 178 SRGGGS 183



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/54 (53%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
 Frame = -3

Query: 199 VIYDKTTGRSRGFGFVTMSTAKEVQAAAQQFDGYELQGRALRVNSGPP-PPKRE 41
           V+YD+ +GRSRGFGFVT S+A+EV  A +  DG +L GRA+RV+     PP+R+
Sbjct: 219 VVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQ 272


>sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
           Full=CP-RBP31; Flags: Precursor gi|19710|emb|CAA46233.1|
           RNA binding protein 31 [Nicotiana plumbaginifolia]
          Length = 292

 Score =  103 bits (258), Expect = 1e-20
 Identities = 49/66 (74%), Positives = 57/66 (86%)
 Frame = -3

Query: 199 VIYDKTTGRSRGFGFVTMSTAKEVQAAAQQFDGYELQGRALRVNSGPPPPKREDSPFRGG 20
           VIYDK +GRSRGFGFVTMST +EV+AA QQF+GYE+ GRA+RVN+GP P KRE+S F GG
Sbjct: 119 VIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGG 178

Query: 19  RGDNSS 2
           RG NSS
Sbjct: 179 RGGNSS 184



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/53 (50%), Positives = 39/53 (73%)
 Frame = -3

Query: 199 VIYDKTTGRSRGFGFVTMSTAKEVQAAAQQFDGYELQGRALRVNSGPPPPKRE 41
           V+YD+ +GRSRGFGFVT S+AKEV  A    +G +L GR++RV++    P+R+
Sbjct: 239 VVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEERPRRQ 291


>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 288

 Score =  103 bits (257), Expect = 1e-20
 Identities = 51/70 (72%), Positives = 60/70 (85%), Gaps = 4/70 (5%)
 Frame = -3

Query: 199 VIYDKTTGRSRGFGFVTMSTAKEVQAAAQQFDGYELQGRALRVNSGPPPPKREDSPFRGG 20
           VIYDK TGRSRGFGFVTMST +EV+AAAQQF+GYEL+GR LRVNSGPPP +RE+S FRG 
Sbjct: 121 VIYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARRENSNFRGE 180

Query: 19  ----RGDNSS 2
               RG+N++
Sbjct: 181 NSNFRGENTN 190



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/53 (52%), Positives = 38/53 (71%)
 Frame = -3

Query: 199 VIYDKTTGRSRGFGFVTMSTAKEVQAAAQQFDGYELQGRALRVNSGPPPPKRE 41
           VIYD+ TGRSRGFGFVT ++A+EV  A +  DG +L GR++RV      P+R+
Sbjct: 235 VIYDRETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEARPRRQ 287