BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000777
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002878480.1| predicted protein [Arabidopsis lyrata subsp....   187   3e-45
ref|NP_566107.1| small nuclear ribonucleoprotein D2 [Arabidopsis...   187   3e-45
gb|ACF06449.1| small nuclear ribonucleoprotein-like protein [Ela...   184   2e-44
ref|XP_004146504.1| PREDICTED: probable small nuclear ribonucleo...   184   2e-44
ref|XP_003525218.1| PREDICTED: probable small nuclear ribonucleo...   184   2e-44

>ref|XP_002878480.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324318|gb|EFH54739.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 109

 Score =  187 bits (475), Expect = 3e-45
 Identities = 93/109 (85%), Positives = 97/109 (88%)
 Frame = -2

Query: 742 MSRPMDXXXXXXXXXXXEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGHVRAFDRHCNM 563
           MS+PM+           EFNTGPLSVLMMSVKNNTQVLINCRNN+KLLG VRAFDRHCNM
Sbjct: 1   MSKPMEEDTTQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNM 60

Query: 562 VLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 416
           VLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK
Sbjct: 61  VLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK 109


>ref|NP_566107.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|145331435|ref|NP_001078076.1| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|145339793|ref|NP_567134.3| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|20196966|gb|AAM14847.1| putative small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|20197310|gb|AAC63620.2| putative small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|330255773|gb|AEC10867.1| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|330255776|gb|AEC10870.1| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|332646879|gb|AEE80400.1| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
          Length = 109

 Score =  187 bits (475), Expect = 3e-45
 Identities = 93/109 (85%), Positives = 97/109 (88%)
 Frame = -2

Query: 742 MSRPMDXXXXXXXXXXXEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGHVRAFDRHCNM 563
           MS+PM+           EFNTGPLSVLMMSVKNNTQVLINCRNN+KLLG VRAFDRHCNM
Sbjct: 1   MSKPMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNM 60

Query: 562 VLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 416
           VLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK
Sbjct: 61  VLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK 109


>gb|ACF06449.1| small nuclear ribonucleoprotein-like protein [Elaeis guineensis]
          Length = 105

 Score =  184 bits (468), Expect = 2e-44
 Identities = 90/91 (98%), Positives = 90/91 (98%)
 Frame = -2

Query: 688 FNTGPLSVLMMSVKNNTQVLINCRNNKKLLGHVRAFDRHCNMVLENVREMWTEVPKTGKG 509
           FNTGPLSVLMMSVKNNTQVLINCRNNKKLLG VRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 15  FNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 74

Query: 508 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK 416
           KKKALPVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 75  KKKALPVNKDRFISKMFLRGDSVIIVLRNPK 105


>ref|XP_004146504.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
           [Cucumis sativus] gi|449499984|ref|XP_004160970.1|
           PREDICTED: probable small nuclear ribonucleoprotein Sm
           D2-like [Cucumis sativus]
          Length = 107

 Score =  184 bits (467), Expect = 2e-44
 Identities = 94/109 (86%), Positives = 95/109 (87%)
 Frame = -2

Query: 742 MSRPMDXXXXXXXXXXXEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGHVRAFDRHCNM 563
           MSRPM+            FNTGPLSVLMMSVKNNTQVLINCRNNKKLLG VRAFDRHCNM
Sbjct: 1   MSRPMEEDTSKNEEEE--FNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM 58

Query: 562 VLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 416
           VLENVREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 59  VLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 107


>ref|XP_003525218.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
           [Glycine max]
          Length = 108

 Score =  184 bits (467), Expect = 2e-44
 Identities = 94/109 (86%), Positives = 95/109 (87%)
 Frame = -2

Query: 742 MSRPMDXXXXXXXXXXXEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGHVRAFDRHCNM 563
           MSRPM+            FNTGPLSVLMMSVKNNTQVLINCRNNKKLLG VRAFDRHCNM
Sbjct: 1   MSRPMEEDTVGKNEEEE-FNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM 59

Query: 562 VLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK 416
           VLENVREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 60  VLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 108