BLASTX nr result

ID: Scutellaria24_contig00000736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000736
         (1021 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation spec...   316   5e-84
emb|CBI27869.3| unnamed protein product [Vitis vinifera]              316   5e-84
ref|XP_002308275.1| predicted protein [Populus trichocarpa] gi|2...   279   9e-73
ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, p...   276   8e-72
ref|NP_001242595.1| uncharacterized protein LOC100791216 [Glycin...   273   4e-71

>ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Vitis vinifera]
          Length = 284

 Score =  316 bits (810), Expect = 5e-84
 Identities = 145/205 (70%), Positives = 171/205 (83%)
 Frame = -3

Query: 860 ENGDSHPSSSTVLDIYPLSCYYFGXXXXXXXXXXXVADRLLRMKANYDAYGIRNCVAAVI 681
           +   S  SS+ VLDIYPLSCYYFG           +ADR+LRMK+NY  YG R CV AVI
Sbjct: 79  DRSSSGDSSNHVLDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSRYGSRTCVVAVI 138

Query: 680 VVELFKHPHLLLLQVQNSIYKFPGGRLRPGESDIDCLKRKLSNKLSAGEDGRGPEWEVGE 501
           +VELFKHPHLLLLQV+NS +K PGGRLRPGES+I+ LKRKLS KLS  EDG G +WEVGE
Sbjct: 139 LVELFKHPHLLLLQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNEDGDGSDWEVGE 198

Query: 500 CLGIWWKPDFESLLYPYLPPNIKRPKECTKLYVVKLPPSRRFIVPKNFRLLAIPLCQLHD 321
           CLG+WW+PDFE+LLYPYLPPN+K PKECTKL++VKLPPSR+FIVPKN +LLAIPLCQLH+
Sbjct: 199 CLGMWWRPDFETLLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHE 258

Query: 320 NEETYGPIVSGAPQLLSKFTFNFIE 246
           N++TYGPI++G PQLLSKF+FN I+
Sbjct: 259 NDKTYGPIIAGVPQLLSKFSFNIID 283


>emb|CBI27869.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  316 bits (810), Expect = 5e-84
 Identities = 145/205 (70%), Positives = 171/205 (83%)
 Frame = -3

Query: 860 ENGDSHPSSSTVLDIYPLSCYYFGXXXXXXXXXXXVADRLLRMKANYDAYGIRNCVAAVI 681
           +   S  SS+ VLDIYPLSCYYFG           +ADR+LRMK+NY  YG R CV AVI
Sbjct: 86  DRSSSGDSSNHVLDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSRYGSRTCVVAVI 145

Query: 680 VVELFKHPHLLLLQVQNSIYKFPGGRLRPGESDIDCLKRKLSNKLSAGEDGRGPEWEVGE 501
           +VELFKHPHLLLLQV+NS +K PGGRLRPGES+I+ LKRKLS KLS  EDG G +WEVGE
Sbjct: 146 LVELFKHPHLLLLQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNEDGDGSDWEVGE 205

Query: 500 CLGIWWKPDFESLLYPYLPPNIKRPKECTKLYVVKLPPSRRFIVPKNFRLLAIPLCQLHD 321
           CLG+WW+PDFE+LLYPYLPPN+K PKECTKL++VKLPPSR+FIVPKN +LLAIPLCQLH+
Sbjct: 206 CLGMWWRPDFETLLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHE 265

Query: 320 NEETYGPIVSGAPQLLSKFTFNFIE 246
           N++TYGPI++G PQLLSKF+FN I+
Sbjct: 266 NDKTYGPIIAGVPQLLSKFSFNIID 290


>ref|XP_002308275.1| predicted protein [Populus trichocarpa] gi|222854251|gb|EEE91798.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  279 bits (713), Expect = 9e-73
 Identities = 130/199 (65%), Positives = 159/199 (79%)
 Frame = -3

Query: 851 DSHPSSSTVLDIYPLSCYYFGXXXXXXXXXXXVADRLLRMKANYDAYGIRNCVAAVIVVE 672
           D++   STV++IYPL  YYFG           +ADR+ RMK+N+ A G+R  V AV++VE
Sbjct: 10  DNNNHQSTVIEIYPLGSYYFGSKDPIAFRDETIADRVQRMKSNFSARGLRTSVQAVMLVE 69

Query: 671 LFKHPHLLLLQVQNSIYKFPGGRLRPGESDIDCLKRKLSNKLSAGEDGRGPEWEVGECLG 492
           LFKHPHLLLLQV+N+ +K PGGRLRPGESDID L+RKLS  LS  ED     WEVG+CLG
Sbjct: 70  LFKHPHLLLLQVRNAFFKLPGGRLRPGESDIDGLQRKLSRMLSVNED-ETDHWEVGDCLG 128

Query: 491 IWWKPDFESLLYPYLPPNIKRPKECTKLYVVKLPPSRRFIVPKNFRLLAIPLCQLHDNEE 312
           +WW+ DFE+LLYPYLPPN+K PKECTKLYVVKLP SR+FIVPKN +LLA+PLCQ+H+N +
Sbjct: 129 MWWRSDFETLLYPYLPPNLKVPKECTKLYVVKLPASRKFIVPKNLKLLAVPLCQVHENHK 188

Query: 311 TYGPIVSGAPQLLSKFTFN 255
           TYGP++SG PQLLSKF+FN
Sbjct: 189 TYGPVISGVPQLLSKFSFN 207


>ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223546548|gb|EEF48046.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 214

 Score =  276 bits (705), Expect = 8e-72
 Identities = 133/209 (63%), Positives = 163/209 (77%), Gaps = 3/209 (1%)
 Frame = -3

Query: 866 VLENGDSHPSSST---VLDIYPLSCYYFGXXXXXXXXXXXVADRLLRMKANYDAYGIRNC 696
           V+ N + H +S     VLDIYPLS YYFG           + DR+ RMK+NY A+G+R C
Sbjct: 6   VVVNNNHHEASRDQGFVLDIYPLSRYYFGSKDPLPFRDETLVDRVQRMKSNYLAHGLRTC 65

Query: 695 VAAVIVVELFKHPHLLLLQVQNSIYKFPGGRLRPGESDIDCLKRKLSNKLSAGEDGRGPE 516
           V AVI+VELFKHPHLLLLQ++NSI+K PGGR+RPGESDI  LKRKLS KLS  +D    +
Sbjct: 66  VEAVILVELFKHPHLLLLQIKNSIFKLPGGRIRPGESDIGGLKRKLSRKLSNNQDQT--D 123

Query: 515 WEVGECLGIWWKPDFESLLYPYLPPNIKRPKECTKLYVVKLPPSRRFIVPKNFRLLAIPL 336
           WEVGECLG+WW+PDFE+LLYPYLPPN+K PKECTKL++V+LP S +FIVPKN +LLA+PL
Sbjct: 124 WEVGECLGMWWRPDFETLLYPYLPPNLKTPKECTKLFLVRLPTSCKFIVPKNLKLLAVPL 183

Query: 335 CQLHDNEETYGPIVSGAPQLLSKFTFNFI 249
            Q+HDN +TYG I+SG PQLLSK++F  I
Sbjct: 184 SQIHDNHKTYGGIISGVPQLLSKYSFRII 212


>ref|NP_001242595.1| uncharacterized protein LOC100791216 [Glycine max]
           gi|255640824|gb|ACU20695.1| unknown [Glycine max]
          Length = 216

 Score =  273 bits (699), Expect = 4e-71
 Identities = 125/192 (65%), Positives = 154/192 (80%), Gaps = 5/192 (2%)
 Frame = -3

Query: 845 HPSS-----STVLDIYPLSCYYFGXXXXXXXXXXXVADRLLRMKANYDAYGIRNCVAAVI 681
           HP+S     S   DIYPLS YYFG           + DR+LRMK+NY A GIR CV AV+
Sbjct: 16  HPNSGNDDQSLEFDIYPLSSYYFGSKDAVPSKDLTLVDRVLRMKSNYAASGIRTCVEAVL 75

Query: 680 VVELFKHPHLLLLQVQNSIYKFPGGRLRPGESDIDCLKRKLSNKLSAGEDGRGPEWEVGE 501
           +VELFKHPHLLLLQ++NSIYK PGGRLRPGESD D LKRKL+ KLS  EDG G EWEVGE
Sbjct: 76  LVELFKHPHLLLLQIRNSIYKLPGGRLRPGESDTDGLKRKLARKLSVNEDGDGSEWEVGE 135

Query: 500 CLGIWWKPDFESLLYPYLPPNIKRPKECTKLYVVKLPPSRRFIVPKNFRLLAIPLCQLHD 321
           CLG+WW+PDFE+L+YP++PPN+++PKECTK+++VKLP SR+ IVPKN R+LA+PLCQ+H+
Sbjct: 136 CLGMWWRPDFETLMYPFIPPNVEKPKECTKVFLVKLPESRKLIVPKNMRVLAVPLCQVHE 195

Query: 320 NEETYGPIVSGA 285
           N +TYG I+SG+
Sbjct: 196 NHKTYGQIISGS 207


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