BLASTX nr result

ID: Scutellaria24_contig00000658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000658
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546827.1| PREDICTED: 50S ribosomal protein L7/L12-like...   194   2e-47
ref|XP_004145130.1| PREDICTED: 54S ribosomal protein L12, mitoch...   187   1e-45
ref|XP_002304265.1| predicted protein [Populus trichocarpa] gi|2...   181   1e-43
ref|XP_003631242.1| PREDICTED: 50S ribosomal protein L7/L12-like...   180   2e-43
gb|AFK38264.1| unknown [Medicago truncatula]                          179   3e-43

>ref|XP_003546827.1| PREDICTED: 50S ribosomal protein L7/L12-like [Glycine max]
          Length = 217

 Score =  194 bits (492), Expect = 2e-47
 Identities = 114/225 (50%), Positives = 144/225 (64%), Gaps = 12/225 (5%)
 Frame = +3

Query: 3   MSLISRARHHLSHGSFREHLCSRVIASCPRNSIGVNRHFAQLATSEKE------VEIDQR 164
           MSL+SR RH+L +G  R+ L   V+     N    +RHF Q A  E+E      VEI+QR
Sbjct: 1   MSLLSRIRHYLPNGLCRQPLHPTVVRLNASNLNVFSRHFGQPARKEEEEEDVEEVEINQR 60

Query: 165 LLPTDYDPTNFDPNNHRSPPSKRVWRLVDEMSGLTLAEAAELSNIMMDKFCSTMMKKLTI 344
            LP D+DP  FDPN+HR PPS+RV+RLVDE++ LT+AEAAEL          T+MKK+ +
Sbjct: 61  SLPADFDPATFDPNDHRGPPSERVFRLVDEVASLTVAEAAELG--------LTLMKKMGV 112

Query: 345 KERFVIMELXXXXXXXXXXXXXXXXXXXXX------VFELKIESYDAASKLKVIKEIRGF 506
           KE   +  +                           VFELK+ESY+AASK+K+IKE+RGF
Sbjct: 113 KEMPNVGFMKAGAGNLAGMAAKAPTAAKEEQKPEKTVFELKLESYEAASKIKIIKEVRGF 172

Query: 507 VGLGLKEAKELVEKAPAVIKKGVSKEEAQDIIDKMKAVGAKVVME 641
             LGLKEAK+LVEK PAVIKKGVSKEE + II+K+KA+GAKVVME
Sbjct: 173 TDLGLKEAKDLVEKTPAVIKKGVSKEEGEQIIEKLKALGAKVVME 217


>ref|XP_004145130.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449454778|ref|XP_004145131.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
           gi|449472279|ref|XP_004153545.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449472282|ref|XP_004153546.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
           gi|449503353|ref|XP_004161960.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449503355|ref|XP_004161961.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
          Length = 214

 Score =  187 bits (475), Expect = 1e-45
 Identities = 104/216 (48%), Positives = 141/216 (65%), Gaps = 3/216 (1%)
 Frame = +3

Query: 3   MSLISRARHHLSHGSFREHLCSRVIASCPRNSIGVNRHFAQ---LATSEKEVEIDQRLLP 173
           M L+SR  H L +  F   + S  +A  P N  G++R++AQ   +   E+EVEIDQR LP
Sbjct: 1   MRLVSRISHLLPN-VFANTIRSSTVALNPLNRNGLHRNYAQPSRIEEEEEEVEIDQRRLP 59

Query: 174 TDYDPTNFDPNNHRSPPSKRVWRLVDEMSGLTLAEAAELSNIMMDKFCSTMMKKLTIKER 353
            DYDP NFDP  HRSPP+ RV+RLVDE+SGLTL E AE+S+I+M K   T M      + 
Sbjct: 60  ADYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAEMSSILMKKLGMTEMPVAGYMKP 119

Query: 354 FVIMELXXXXXXXXXXXXXXXXXXXXXVFELKIESYDAASKLKVIKEIRGFVGLGLKEAK 533
             +  L                     V+ELK+ESY+A++K+K+IKE+R    LGLKEAK
Sbjct: 120 GAV-GLAGMVKKGSSATAKEEKKAEKTVYELKLESYEASAKIKIIKEVRSLTDLGLKEAK 178

Query: 534 ELVEKAPAVIKKGVSKEEAQDIIDKMKAVGAKVVME 641
           +LV+KAP+V+KKG+SKEE + I++KMKA+GAKV++E
Sbjct: 179 DLVDKAPSVLKKGLSKEEGEQIVEKMKALGAKVILE 214


>ref|XP_002304265.1| predicted protein [Populus trichocarpa] gi|222841697|gb|EEE79244.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  181 bits (459), Expect = 1e-43
 Identities = 107/219 (48%), Positives = 139/219 (63%), Gaps = 6/219 (2%)
 Frame = +3

Query: 3   MSLISRARHHLSHGSFREHLCSRVIASCPRNSIGV-NRHFAQLATS-----EKEVEIDQR 164
           MSLISR RH L +G   +   S ++   P N   V +R FA+ A       E+EVEIDQR
Sbjct: 1   MSLISRLRHCLPNGFSTKPTISPLM---PLNFNAVLSRGFAEAARKVEAEEEEEVEIDQR 57

Query: 165 LLPTDYDPTNFDPNNHRSPPSKRVWRLVDEMSGLTLAEAAELSNIMMDKFCSTMMKKLTI 344
            LPTDYDP  FDP  HRSPP++RV++LV+E++GLTL E +EL  I+M +   T    + +
Sbjct: 58  RLPTDYDPATFDPTEHRSPPTERVFKLVEEIAGLTLMEISELGTIIMKRMKMTEPPTIGV 117

Query: 345 KERFVIMELXXXXXXXXXXXXXXXXXXXXXVFELKIESYDAASKLKVIKEIRGFVGLGLK 524
            +                            VFELK+ES++AASK+KVIKE+R F  LGLK
Sbjct: 118 LKGGAAGLAGMAMKAPAAAAAKEEKKAEKTVFELKLESFEAASKIKVIKEVRSFTDLGLK 177

Query: 525 EAKELVEKAPAVIKKGVSKEEAQDIIDKMKAVGAKVVME 641
           EAK+LVEK P+V+KKGVSKEE + II+KMKA+GAKVV+E
Sbjct: 178 EAKDLVEKTPSVLKKGVSKEEGEQIIEKMKAIGAKVVLE 216


>ref|XP_003631242.1| PREDICTED: 50S ribosomal protein L7/L12-like [Vitis vinifera]
          Length = 206

 Score =  180 bits (456), Expect = 2e-43
 Identities = 111/227 (48%), Positives = 140/227 (61%), Gaps = 14/227 (6%)
 Frame = +3

Query: 3   MSLISRA-RHHLSHGSFREHLCSRVIASCPRNSIGVNRHFAQLAT------SEKEVEIDQ 161
           MSLI+R+ RHH     F    C        RNS   +R  +Q A       SE+EVEIDQ
Sbjct: 1   MSLITRSSRHH-----FLSTFC--------RNSAIFSRKLSQAAANKVDDESEEEVEIDQ 47

Query: 162 RLLPTDYDPTNFDPNNHRSPPSKRVWRLVDEMSGLTLAEAAELSNIMMDKFCSTMMKKLT 341
           R LP DYDP NFDP  HRSPP+ RV+RLVDE++GLTL E AELS+I+         KKL 
Sbjct: 48  RRLPADYDPANFDPTQHRSPPTARVFRLVDEIAGLTLVEVAELSSILR--------KKLG 99

Query: 342 IKERFVI-------MELXXXXXXXXXXXXXXXXXXXXXVFELKIESYDAASKLKVIKEIR 500
           +KE  V+       +                       VFELK+ESY+AASK+K+IKE+R
Sbjct: 100 MKEPPVVAIMKPGAVAAVSGGGMKAASAAKEEKKPEKTVFELKLESYEAASKIKIIKEVR 159

Query: 501 GFVGLGLKEAKELVEKAPAVIKKGVSKEEAQDIIDKMKAVGAKVVME 641
            F  LGLKEAK+LVEKAP+V+K GVSKEE + +++K+KA+GAKVV+E
Sbjct: 160 SFTDLGLKEAKDLVEKAPSVLKAGVSKEEGEQLVEKLKALGAKVVLE 206


>gb|AFK38264.1| unknown [Medicago truncatula]
          Length = 216

 Score =  179 bits (455), Expect = 3e-43
 Identities = 107/224 (47%), Positives = 137/224 (61%), Gaps = 11/224 (4%)
 Frame = +3

Query: 3   MSLISRARHHLSHGSFREHLCSRVIASCPRNSIGVNRHFAQLATSEKE-----VEIDQRL 167
           MSL+ R RH L +G +R+ L    I    R     +R+F Q A  E+E     VEIDQR 
Sbjct: 1   MSLLLRIRHRLHNGFYRQPLYESTIGLNARKLNVFSRNFGQAARKEEEEDVEEVEIDQRS 60

Query: 168 LPTDYDPTNFDPNNHRSPPSKRVWRLVDEMSGLTLAEAAELSNIMMDKFCSTMMKKLTIK 347
           LP D+DP  FDP N+R PPS+RV+RLVDE++ LTLAE AEL  I+M        KK+ IK
Sbjct: 61  LPADFDPATFDPTNNRGPPSERVFRLVDEVASLTLAEGAELGLILM--------KKMGIK 112

Query: 348 ERFVIMELXXXXXXXXXXXXXXXXXXXXXV------FELKIESYDAASKLKVIKEIRGFV 509
           E   +  +                     V      FELK+ S++A SK+KVIKE+RGF 
Sbjct: 113 EMPNVGYMKAGSANLAGMATKTTTAAQEEVKPEKTVFELKLLSFEATSKIKVIKEVRGFT 172

Query: 510 GLGLKEAKELVEKAPAVIKKGVSKEEAQDIIDKMKAVGAKVVME 641
            LGLKEAK++VEK P++IKKGVSKEE + II+KMKA+GA VV+E
Sbjct: 173 DLGLKEAKDIVEKTPSIIKKGVSKEEGEQIIEKMKALGANVVLE 216


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