BLASTX nr result

ID: Scutellaria24_contig00000636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000636
         (1577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 ...   275   3e-71
ref|XP_003591073.1| RING finger family protein [Medicago truncat...   267   7e-69
ref|XP_002328426.1| predicted protein [Populus trichocarpa] gi|2...   247   5e-63
ref|XP_003626315.1| RING finger protein [Medicago truncatula] gi...   245   3e-62
ref|XP_002882402.1| hypothetical protein ARALYDRAFT_477807 [Arab...   239   1e-60

>ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 isoform 1 [Vitis
            vinifera] gi|147843962|emb|CAN83712.1| hypothetical
            protein VITISV_011102 [Vitis vinifera]
          Length = 420

 Score =  275 bits (702), Expect = 3e-71
 Identities = 180/385 (46%), Positives = 217/385 (56%), Gaps = 31/385 (8%)
 Frame = -2

Query: 1477 SRNGIRLGLSLI------EHGPVSLIFXXXXLPEIAMVGAQSGPPANENGYPYARFSPSM 1316
            +RNG  L   L+      +HG VSL      LP     GAQS    + + Y   RFS SM
Sbjct: 10   NRNGATLVCGLLRFGGFSQHGTVSLWILLLLLP---FAGAQSD--TSNDPYQQQRFSSSM 64

Query: 1315 AIIIAVLISALFFMGFFSIYIRHCXXXXXXXXXXXXXXXXXXXXXXXXXXLDRSVLDTFP 1136
            AIII +L++ALF MGFFS+YIRHC                          LD++VL+TFP
Sbjct: 65   AIIIVILVAALFLMGFFSVYIRHCSDSRNGGSIRAAAGAALGRSRRGTRGLDQAVLETFP 124

Query: 1135 TFSYSEVKDHKIGKGTLECAVCLNEFEENETLRLLPKCDHVFHPECIDAWLESHVTCPVC 956
            TF YS VK  KIGKG LECAVCLNEFE+NETLRL+PKCDHVFHPECIDAWL SHVTCPVC
Sbjct: 125  TFEYSVVKGLKIGKGVLECAVCLNEFEDNETLRLIPKCDHVFHPECIDAWLASHVTCPVC 184

Query: 955  RANLTPGAADQPAEPTGADQAEAATDSRNE----------------EVVIQVDDNQG--L 830
            RANLT     +PA PT    A  A +S  E                EV I+V D++    
Sbjct: 185  RANLT-----EPAVPTDYSAAVEAAESAGESDHDGEDRRSEINAVREVSIRVADDETDVQ 239

Query: 829  AGAGATSRNSSFEYXXXXXXXXXXXXXXILGFGKF-RSHSTGHAVVPPGENLERFTLRLP 653
                  + N S                      KF RSHSTGH+++ PGEN ERFTL+LP
Sbjct: 240  QAPDVINPNQSLHQNRPPRSKSTRPR-------KFPRSHSTGHSLIQPGENCERFTLKLP 292

Query: 652  EGVRKEVLNRAMLNRARSFATVLPTEGSSRRGYRTGEEEGSSRAGRFYQRIEIPGRDIKS 473
            E VRK+++ RA LNR  S   VLP +GSSR+GYRT   EGSSR G+ ++R +   R  KS
Sbjct: 293  EDVRKQIMKRA-LNRTTSL-LVLPRDGSSRQGYRTA-GEGSSR-GKNFRRFDRLERSGKS 348

Query: 472  DRWS------IFTRGLSFRSPRVKA 416
            DRW+       F+R  S +SP+V A
Sbjct: 349  DRWTFSITPPFFSRASSLKSPKVAA 373


>ref|XP_003591073.1| RING finger family protein [Medicago truncatula]
            gi|355480121|gb|AES61324.1| RING finger family protein
            [Medicago truncatula] gi|388512099|gb|AFK44111.1| unknown
            [Medicago truncatula]
          Length = 373

 Score =  267 bits (682), Expect = 7e-69
 Identities = 166/350 (47%), Positives = 195/350 (55%), Gaps = 13/350 (3%)
 Frame = -2

Query: 1432 PVSLIFXXXXLPEIAMVGAQSGPPANENGYPYARFSPSMAIIIAVLISALFFMGFFSIYI 1253
            P+   F       +   GAQ+    N+N Y Y R SPSMAIII +L++ALF MGFFSIYI
Sbjct: 12   PLCFFFIFIFFSGVPFAGAQTNDNTNDNSY-YNRVSPSMAIIIVILVAALFLMGFFSIYI 70

Query: 1252 RHCXXXXXXXXXXXXXXXXXXXXXXXXXXLDRSVLDTFPTFSYSEVKDHKIGKGTLECAV 1073
            R C                           D SV+ TFP F YS VK HKIGKG LECAV
Sbjct: 71   RRCGDSPSNSIRNMAGGLAGRSRRAARGL-DASVIATFPIFEYSTVKIHKIGKGALECAV 129

Query: 1072 CLNEFEENETLRLLPKCDHVFHPECIDAWLESHVTCPVCRANLTPGAADQ----PAEPTG 905
            CLNEFEE+ETLRL+PKCDHVFHPECID WL SH TCPVCRANL P   +     P+  T 
Sbjct: 130  CLNEFEESETLRLIPKCDHVFHPECIDEWLGSHTTCPVCRANLVPQPGESVHGIPSINTE 189

Query: 904  ADQAEAATDSRNEEVVIQVDDNQGLAGAGATSRNSSFEYXXXXXXXXXXXXXXILGFGKF 725
                EA  D+     V  V ++Q   G+                           G  ++
Sbjct: 190  PQDIEAQNDA-----VESVHEHQNADGSVKVDPTEPEVLTVSQTLNRNRTRGSQSGRPRW 244

Query: 724  --RSHSTGHAVVPPGENLERFTLRLPEGVRKEVLNRAMLNRARSFATVLPTEGSSRRGYR 551
              RSHSTGH++V PGEN ERFTLRLP  VRK++L    L+RARS   VLP E SSRRGYR
Sbjct: 245  FQRSHSTGHSLVQPGENTERFTLRLPVEVRKQILQNPELHRARSL-VVLPRETSSRRGYR 303

Query: 550  TGEEEGSSRAGRFYQRIEIPGRDIKSDRWSIFT-------RGLSFRSPRV 422
            TG  EGSSR G+  +R++   R + SDRW +FT       R  S RSPRV
Sbjct: 304  TGGGEGSSR-GKSVRRLD---RGLLSDRW-VFTMAPPFLVRASSMRSPRV 348


>ref|XP_002328426.1| predicted protein [Populus trichocarpa] gi|222838141|gb|EEE76506.1|
            predicted protein [Populus trichocarpa]
          Length = 374

 Score =  247 bits (631), Expect = 5e-63
 Identities = 157/336 (46%), Positives = 185/336 (55%), Gaps = 26/336 (7%)
 Frame = -2

Query: 1345 YPYARFSPSMAIIIAVLISALFFMGFFSIYIRHCXXXXXXXXXXXXXXXXXXXXXXXXXX 1166
            Y YAR +PSMAIII VLI+ LF MGFFSIYIRHC                          
Sbjct: 30   YNYARVTPSMAIIIVVLIAVLFIMGFFSIYIRHCNEANGNGSIRPLGMGGLSRRVAASRG 89

Query: 1165 LDRSVLDTFPTFSYSEVKDHKIGKGTLECAVCLNEFEENETLRLLPKCDHVFHPECIDAW 986
            LD +V++TFPT  YS VK  KIGKG LECAVCLNEFEE+ETLRL+P CDHVFHP+CI AW
Sbjct: 90   LDPAVIETFPTLIYSVVKGLKIGKGALECAVCLNEFEEDETLRLIPNCDHVFHPDCIGAW 149

Query: 985  LESHVTCPVCRANLTPGAADQP------------AEPTGADQAEAATDSRNEEVVIQVDD 842
            LESH TCPVCRA+LT  A   P                GA   E    + N EVV    +
Sbjct: 150  LESHTTCPVCRADLTKPADSVPQLGESHDPELDLEAQNGAVMDEPENGNANVEVVGPEPE 209

Query: 841  NQGLAGAGATSRNSSFEYXXXXXXXXXXXXXXILGFGKFRSHSTGHAVVPPGENLERFTL 662
              G +     +RN +                  L F   RSHSTGH+VV PGEN +RFTL
Sbjct: 210  VMGASVVKTLNRNRT----------RGSRSGRPLRF--TRSHSTGHSVVQPGENTDRFTL 257

Query: 661  RLPEGVRKEVLNRAMLNRARSFATVLPTEGSSRRGYRTGEEEGSSRAGRFYQRIEIPGRD 482
            RLP  VRK+V+NR  LNRA S   VL  +GSS +G + G  EGS R    Y+R+E   ++
Sbjct: 258  RLPVEVRKQVMNR-KLNRAMSM-VVLSRQGSSVKGNKNGVGEGSPRKVLNYKRLEKLDQE 315

Query: 481  IKSDRW------SIFTRGLSF--------RSPRVKA 416
             +SDRW      S+  R  SF        RSP+V A
Sbjct: 316  ARSDRWVFSRNPSLLARASSFLSRASSSVRSPKVAA 351


>ref|XP_003626315.1| RING finger protein [Medicago truncatula] gi|87240525|gb|ABD32383.1|
            Zinc finger, RING-type [Medicago truncatula]
            gi|355501330|gb|AES82533.1| RING finger protein [Medicago
            truncatula]
          Length = 361

 Score =  245 bits (625), Expect = 3e-62
 Identities = 144/310 (46%), Positives = 178/310 (57%), Gaps = 6/310 (1%)
 Frame = -2

Query: 1330 FSPSMAIIIAVLISALFFMGFFSIYIRHCXXXXXXXXXXXXXXXXXXXXXXXXXXLDRSV 1151
            F+PS AIII +L++ALF MGFFSIYIR C                           D SV
Sbjct: 40   FNPSFAIIIVILVAALFLMGFFSIYIRRCSDSPSSNNLLLPITNGRRAVARGL---DPSV 96

Query: 1150 LDTFPTFSYSEVKDHKIGKGTLECAVCLNEFEENETLRLLPKCDHVFHPECIDAWLESHV 971
            ++TFP   YSEVK HKIGK  LECAVCL EFE+ ETLRL+PKCDHVFHPECID WL SH 
Sbjct: 97   IETFPILEYSEVKIHKIGKDVLECAVCLMEFEDTETLRLIPKCDHVFHPECIDEWLSSHT 156

Query: 970  TCPVCRANLTPGAADQPAEPTGADQAEAATDSRNEEVVIQVDDNQGLAGAGATSRNSSFE 791
            TCPVCRANL P   D       + Q +   +++N+ V +  + +  L      S N +  
Sbjct: 157  TCPVCRANLVPQPGDSVHGVPESQQQD--VEAQNDAVQLPTESDSVLLAPEVISLNKTLN 214

Query: 790  YXXXXXXXXXXXXXXILGFGKFRSHSTGHAVVPPGENLERFTLRLPEGVRKEVLNRAMLN 611
                                  RSHSTGH+++ PGEN +RFTL+LP  VRK++++R  L 
Sbjct: 215  RNRTRGSQSNRPRRFP------RSHSTGHSLIQPGENTDRFTLKLPNKVRKQIMSR-QLQ 267

Query: 610  RARSFATVLPTEGSSRRGYRTGEEEGSSRAGRFYQRIEIPGRDIKSDRW------SIFTR 449
            RARS  T LP E SSR GYRTG  EGS+R G+  +R+++     KSDRW      S   R
Sbjct: 268  RARSLIT-LPRESSSRHGYRTG-GEGSNR-GKSLRRLDL---SFKSDRWIFNRAPSFLAR 321

Query: 448  GLSFRSPRVK 419
             LSFRSP+ K
Sbjct: 322  ALSFRSPKPK 331


>ref|XP_002882402.1| hypothetical protein ARALYDRAFT_477807 [Arabidopsis lyrata subsp.
            lyrata] gi|297328242|gb|EFH58661.1| hypothetical protein
            ARALYDRAFT_477807 [Arabidopsis lyrata subsp. lyrata]
          Length = 398

 Score =  239 bits (610), Expect = 1e-60
 Identities = 135/289 (46%), Positives = 161/289 (55%), Gaps = 12/289 (4%)
 Frame = -2

Query: 1387 MVGAQSGPPANENGYPYARFSPSMAIIIAVLISALFFMGFFSIYIRHCXXXXXXXXXXXX 1208
            +  +QS P      Y Y R SP+MA+I+ +LI+ALFFMGFFSIY RHC            
Sbjct: 26   LAASQSQPGPANQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCSGVPDAGVSPAG 85

Query: 1207 XXXXXXXXXXXXXXLDRSVLDTFPTFSYSEVKDHKIGKGTLECAVCLNEFEENETLRLLP 1028
                          LD SV++TFPTF YS+VK  K+GKG LECA+CLNEFE++ETLRLLP
Sbjct: 86   GARSRATVNAAARGLDASVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLP 145

Query: 1027 KCDHVFHPECIDAWLESHVTCPVCRANLTPGAAD-QPAEPTGADQ-----------AEAA 884
            KCDHVFHP CIDAWLE+HVTCPVCRANL    A+ +  EP G +                
Sbjct: 146  KCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEGESVEPGGTEPDLELQQVVVNPEPVV 205

Query: 883  TDSRNEEVVIQVDDNQGLAGAGATSRNSSFEYXXXXXXXXXXXXXXILGFGKFRSHSTGH 704
            T    E+VV    D++ L G     +   F                       RSH+TGH
Sbjct: 206  TAPVPEQVVTSEVDSRRLPGVPVDLKRVKFS----------------------RSHTTGH 243

Query: 703  AVVPPGENLERFTLRLPEGVRKEVLNRAMLNRARSFATVLPTEGSSRRG 557
            +VV PGE  ERFTLRLPE VRK ++    LNR  S   VLP  GSSRRG
Sbjct: 244  SVVQPGECTERFTLRLPEDVRKRIMREWKLNRTNSL-LVLPRGGSSRRG 291


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