BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000619
         (834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298222.1| predicted protein [Populus trichocarpa] gi|2...   114   2e-23
ref|XP_004141765.1| PREDICTED: 30S ribosomal protein S17, chloro...   114   4e-23
emb|CBI36128.3| unnamed protein product [Vitis vinifera]              113   5e-23
gb|AAA84030.1| ribosomal protein S17, partial (chloroplast) [Ara...   105   1e-20
pdb|3BBN|Q Chain Q, Homology Model For The Spinach Chloroplast 3...   105   1e-20

>ref|XP_002298222.1| predicted protein [Populus trichocarpa] gi|222845480|gb|EEE83027.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  114 bits (286), Expect = 2e-23
 Identities = 77/157 (49%), Positives = 87/157 (55%), Gaps = 5/157 (3%)
 Frame = -2

Query: 725 MLLTSPPILQQFKSLSLTTPFLHGGGATATHLLKPTSFXXXXXXXSLV----IKAMRSLQ 558
           MLLT   +     SL+L+TPFLHG     +HL KPTS               I+AM+SLQ
Sbjct: 1   MLLTMS-LTSSLNSLTLSTPFLHGT-TQLSHLSKPTSSLTLRPAKPFTFLPPIRAMKSLQ 58

Query: 557 GKVVGTTNDKTVAVEVVRLAPHPXXXXXXXXXXXYQAHDPFNQFQVGDIVLLEKCLPISK 378
           GKVV  T+DKTVAVEV RLAPHP           YQAHDP NQF+VGD+V LEK  PISK
Sbjct: 59  GKVVCATSDKTVAVEVTRLAPHPKYKRRVRKKKKYQAHDPENQFKVGDLVQLEKSRPISK 118

Query: 377 TKSF-XXXXXXXXXXXXXXXXXXXXXPQELGIPLESE 270
           TKSF                       QELGIPLES+
Sbjct: 119 TKSFLAVPVPARKKKEKKEGEEGGVGSQELGIPLESQ 155


>ref|XP_004141765.1| PREDICTED: 30S ribosomal protein S17, chloroplastic-like [Cucumis
           sativus] gi|449519627|ref|XP_004166836.1| PREDICTED: 30S
           ribosomal protein S17, chloroplastic-like [Cucumis
           sativus]
          Length = 164

 Score =  114 bits (284), Expect = 4e-23
 Identities = 76/155 (49%), Positives = 86/155 (55%), Gaps = 4/155 (2%)
 Frame = -2

Query: 722 LLTSPPILQQFKSLSLTTPFLHGGGATATHLLKPTS----FXXXXXXXSLVIKAMRSLQG 555
           LL  PP+ Q  K LS+++ FLHG     + L KP+S    F          I+AMRSLQG
Sbjct: 10  LLQIPPV-QSLKKLSISSSFLHGS-TPLSFLSKPSSSSSPFPSQTPNFLPSIRAMRSLQG 67

Query: 554 KVVGTTNDKTVAVEVVRLAPHPXXXXXXXXXXXYQAHDPFNQFQVGDIVLLEKCLPISKT 375
           +VV  TNDKTVAVEVVRLAPHP           YQAHDP NQFQVGD V LEKC PISK 
Sbjct: 68  RVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFQVGDFVELEKCRPISKM 127

Query: 374 KSFXXXXXXXXXXXXXXXXXXXXXPQELGIPLESE 270
           K+F                       ELGIPLES+
Sbjct: 128 KTFLAIPVPARNSKKKAVEGGEGG--ELGIPLESQ 160


>emb|CBI36128.3| unnamed protein product [Vitis vinifera]
          Length = 189

 Score =  113 bits (283), Expect = 5e-23
 Identities = 70/143 (48%), Positives = 85/143 (59%), Gaps = 5/143 (3%)
 Frame = -2

Query: 779 TQKHLNHLSHV-LSTPKPRMLLTSPPILQQFKSLSLTTPFLHGGGATATHLLKPTSFXXX 603
           T KH  +  H     PKP  +L   P +   +SL LTTPFLHG  +  + L KP+S    
Sbjct: 18  TPKHTQNPIHKDWQKPKPTHILLPNPAMSLLQSLKLTTPFLHGS-SNLSLLSKPSSTSLA 76

Query: 602 XXXXSLV----IKAMRSLQGKVVGTTNDKTVAVEVVRLAPHPXXXXXXXXXXXYQAHDPF 435
                      I+AM+S+QG+VV  T+DKTVAVEVVRLAPHP           YQAHDP 
Sbjct: 77  SPPPPPTFLPPIRAMKSMQGRVVCATSDKTVAVEVVRLAPHPKYKRRVRKKKKYQAHDPD 136

Query: 434 NQFQVGDIVLLEKCLPISKTKSF 366
           NQF+VGD+V LEK  PISKTK+F
Sbjct: 137 NQFKVGDVVQLEKSRPISKTKTF 159


>gb|AAA84030.1| ribosomal protein S17, partial (chloroplast) [Arabidopsis thaliana]
          Length = 159

 Score =  105 bits (262), Expect = 1e-20
 Identities = 62/122 (50%), Positives = 80/122 (65%), Gaps = 1/122 (0%)
 Frame = -2

Query: 728 RMLLTSPPILQQFKSLSLTTPFLHGGGATATHLLKPTSFXXXXXXXSL-VIKAMRSLQGK 552
           RM+ +S  +    ++L L++PF HG    ++ L KP SF        + VI+AM+++QG+
Sbjct: 10  RMITSS--LTSSLQALKLSSPFAHGSTPLSS-LSKPNSFPNHRMPALVPVIRAMKTMQGR 66

Query: 551 VVGTTNDKTVAVEVVRLAPHPXXXXXXXXXXXYQAHDPFNQFQVGDIVLLEKCLPISKTK 372
           VV  T+DKTVAVEVVRLAPHP           YQAHDP NQF+VGD+V LEK  PISKTK
Sbjct: 67  VVCATSDKTVAVEVVRLAPHPKYKRRVRMKKKYQAHDPDNQFKVGDVVRLEKSRPISKTK 126

Query: 371 SF 366
           SF
Sbjct: 127 SF 128


>pdb|3BBN|Q Chain Q, Homology Model For The Spinach Chloroplast 30s Subunit
           Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
          Length = 142

 Score =  105 bits (262), Expect = 1e-20
 Identities = 62/122 (50%), Positives = 80/122 (65%), Gaps = 1/122 (0%)
 Frame = -2

Query: 728 RMLLTSPPILQQFKSLSLTTPFLHGGGATATHLLKPTSFXXXXXXXSL-VIKAMRSLQGK 552
           RM+ +S  +    ++L L++PF HG    ++ L KP SF        + VI+AM+++QG+
Sbjct: 10  RMITSS--LTSSLQALKLSSPFAHGSTPLSS-LSKPNSFPNHRMPALVPVIRAMKTMQGR 66

Query: 551 VVGTTNDKTVAVEVVRLAPHPXXXXXXXXXXXYQAHDPFNQFQVGDIVLLEKCLPISKTK 372
           VV  T+DKTVAVEVVRLAPHP           YQAHDP NQF+VGD+V LEK  PISKTK
Sbjct: 67  VVCATSDKTVAVEVVRLAPHPKYKRRVRMKKKYQAHDPDNQFKVGDVVRLEKSRPISKTK 126

Query: 371 SF 366
           SF
Sbjct: 127 SF 128