BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000586
         (1447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop...   143   1e-31
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,...   143   1e-31
ref|XP_003535181.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   142   2e-31
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c...   141   4e-31
ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   141   4e-31

>ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus] gi|449483348|ref|XP_004156563.1| PREDICTED: 29
           kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 278

 Score =  143 bits (361), Expect = 1e-31
 Identities = 82/166 (49%), Positives = 96/166 (57%)
 Frame = -2

Query: 939 VTMATVXXXXXXXXQFNGYELEGRVLRVNCGPPPAKXXXXXXXXXXXXXXRPMDNSNKLH 760
           VTM+TV        QFNGYEL+GR+LRVN GPPP K                 DN N++H
Sbjct: 139 VTMSTVGEVEAAAQQFNGYELDGRLLRVNYGPPPPKRDDSSFRGSRNASR--FDNRNRVH 196

Query: 759 VGNLSWGVDNLALETLFSEHGNVKEARXXXXXXXXXXXXXXXXXXXXXXGNVKEARVVYD 580
           V NL+WGVD+L LE LF E GNV EA                             +VVYD
Sbjct: 197 VSNLAWGVDDLTLENLFREKGNVLEA-----------------------------KVVYD 227

Query: 579 RENGRSRGFGFVTYSSPEEVNNAIEELDGADLDGRPIRVSPAGDRP 442
           R++G+SRGFGFVTY+S EEVN AI+ LDG DLDGRPIRV+ A  RP
Sbjct: 228 RDSGKSRGFGFVTYNSAEEVNEAIQSLDGVDLDGRPIRVTQAEARP 273


>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
           Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
           29kD A ribonucleoprotein [Nicotiana sylvestris]
          Length = 273

 Score =  143 bits (361), Expect = 1e-31
 Identities = 84/166 (50%), Positives = 97/166 (58%)
 Frame = -2

Query: 939 VTMATVXXXXXXXXQFNGYELEGRVLRVNCGPPPAKXXXXXXXXXXXXXXRPMDNSNKLH 760
           VTM++         QFNGYEL+GR LRVN GPPP K                 D+SN+++
Sbjct: 133 VTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGS-FDSSNRVY 191

Query: 759 VGNLSWGVDNLALETLFSEHGNVKEARXXXXXXXXXXXXXXXXXXXXXXGNVKEARVVYD 580
           VGNL+WGVD  ALETLFSE G V +A+                             VVYD
Sbjct: 192 VGNLAWGVDQDALETLFSEQGKVVDAK-----------------------------VVYD 222

Query: 579 RENGRSRGFGFVTYSSPEEVNNAIEELDGADLDGRPIRVSPAGDRP 442
           R++GRSRGFGFVTYSS EEVNNAIE LDG DL+GR IRVSPA  RP
Sbjct: 223 RDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARP 268



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 39/103 (37%), Positives = 51/103 (49%)
 Frame = -2

Query: 768 KLHVGNLSWGVDNLALETLFSEHGNVKEARXXXXXXXXXXXXXXXXXXXXXXGNVKEARV 589
           K+ VGNL +  D+ AL  LF                                GNV+   V
Sbjct: 88  KIFVGNLPFSADSAALAELFER-----------------------------AGNVEMVEV 118

Query: 588 VYDRENGRSRGFGFVTYSSPEEVNNAIEELDGADLDGRPIRVS 460
           +YD+  GRSRGFGFVT SS EEV  A ++ +G +LDGR +RV+
Sbjct: 119 IYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVN 161


>ref|XP_003535181.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
           max]
          Length = 275

 Score =  142 bits (358), Expect = 2e-31
 Identities = 80/170 (47%), Positives = 100/170 (58%), Gaps = 4/170 (2%)
 Frame = -2

Query: 939 VTMATVXXXXXXXXQFNGYELEGRVLRVNCGPPPAKXXXXXXXXXXXXXXR----PMDNS 772
           VTM++V        QFNGYEL+GR LRVN GPPPA+                   P D+ 
Sbjct: 132 VTMSSVEEAEAAAQQFNGYELDGRALRVNSGPPPARNESAPRFRGGSSFGSRGGGPSDSE 191

Query: 771 NKLHVGNLSWGVDNLALETLFSEHGNVKEARXXXXXXXXXXXXXXXXXXXXXXGNVKEAR 592
           N++HV NL+WGVDN+AL++LF E GNV EA                             R
Sbjct: 192 NRVHVSNLAWGVDNVALKSLFREQGNVLEA-----------------------------R 222

Query: 591 VVYDRENGRSRGFGFVTYSSPEEVNNAIEELDGADLDGRPIRVSPAGDRP 442
           V+YDRE+GRSRGFGFVT+SSP+EVN+AI+ L+G DL+GR IRVS A  +P
Sbjct: 223 VIYDRESGRSRGFGFVTFSSPDEVNSAIQSLNGVDLNGRAIRVSLADSKP 272



 Score = 64.7 bits (156), Expect = 6e-08
 Identities = 39/103 (37%), Positives = 50/103 (48%)
 Frame = -2

Query: 768 KLHVGNLSWGVDNLALETLFSEHGNVKEARXXXXXXXXXXXXXXXXXXXXXXGNVKEARV 589
           KL VGNL + VD+  L  LF                                GNV+   V
Sbjct: 87  KLFVGNLPFNVDSAQLAELFES-----------------------------AGNVEVVEV 117

Query: 588 VYDRENGRSRGFGFVTYSSPEEVNNAIEELDGADLDGRPIRVS 460
           +YD+  GRSRGFGFVT SS EE   A ++ +G +LDGR +RV+
Sbjct: 118 IYDKTTGRSRGFGFVTMSSVEEAEAAAQQFNGYELDGRALRVN 160


>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
           Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1|
           RNA binding protein 30 [Nicotiana plumbaginifolia]
          Length = 279

 Score =  141 bits (356), Expect = 4e-31
 Identities = 84/171 (49%), Positives = 97/171 (56%), Gaps = 5/171 (2%)
 Frame = -2

Query: 939 VTMATVXXXXXXXXQFNGYELEGRVLRVNCGPPPAKXXXXXXXXXXXXXXRP-----MDN 775
           VTM++         QFNGYEL+GR LRVN GPPP K                      D+
Sbjct: 133 VTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDS 192

Query: 774 SNKLHVGNLSWGVDNLALETLFSEHGNVKEARXXXXXXXXXXXXXXXXXXXXXXGNVKEA 595
           SN+++VGNL+WGVD  ALETLFSE G V +A+                            
Sbjct: 193 SNRVYVGNLAWGVDQDALETLFSEQGKVVDAK---------------------------- 224

Query: 594 RVVYDRENGRSRGFGFVTYSSPEEVNNAIEELDGADLDGRPIRVSPAGDRP 442
            VVYDR++GRSRGFGFVTYSS EEVNNAIE LDG DL+GR IRVSPA  RP
Sbjct: 225 -VVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARP 274



 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 39/103 (37%), Positives = 51/103 (49%)
 Frame = -2

Query: 768 KLHVGNLSWGVDNLALETLFSEHGNVKEARXXXXXXXXXXXXXXXXXXXXXXGNVKEARV 589
           K+ VGNL +  D+ AL  LF                                GNV+   V
Sbjct: 88  KIFVGNLLFSADSAALAELFER-----------------------------AGNVEMVEV 118

Query: 588 VYDRENGRSRGFGFVTYSSPEEVNNAIEELDGADLDGRPIRVS 460
           +YD+  GRSRGFGFVT SS EEV  A ++ +G +LDGR +RV+
Sbjct: 119 IYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVN 161


>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 288

 Score =  141 bits (356), Expect = 4e-31
 Identities = 85/178 (47%), Positives = 99/178 (55%), Gaps = 12/178 (6%)
 Frame = -2

Query: 939 VTMATVXXXXXXXXQFNGYELEGRVLRVNCGPPPAKXXXXXXXXXXXXXXRP-------- 784
           VTM+TV        QFNGYELEGR LRVN GPPPA+                        
Sbjct: 136 VTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARRENSNFRGENSNFRGENTNFRGPR 195

Query: 783 ----MDNSNKLHVGNLSWGVDNLALETLFSEHGNVKEARXXXXXXXXXXXXXXXXXXXXX 616
               ++++N+++VGNLSWGVD+LALETLFSE G V EAR                     
Sbjct: 196 GGANLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEAR--------------------- 234

Query: 615 XGNVKEARVVYDRENGRSRGFGFVTYSSPEEVNNAIEELDGADLDGRPIRVSPAGDRP 442
                   V+YDRE GRSRGFGFVTY+S EEVN AIE LDG DL+GR IRV+ A  RP
Sbjct: 235 --------VIYDRETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEARP 284



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 38/103 (36%), Positives = 52/103 (50%)
 Frame = -2

Query: 768 KLHVGNLSWGVDNLALETLFSEHGNVKEARXXXXXXXXXXXXXXXXXXXXXXGNVKEARV 589
           KL VGNL + VD+  L  LF +                              GNV+   V
Sbjct: 91  KLFVGNLPFNVDSAGLAGLFEQ-----------------------------AGNVEMVEV 121

Query: 588 VYDRENGRSRGFGFVTYSSPEEVNNAIEELDGADLDGRPIRVS 460
           +YD+  GRSRGFGFVT S+ EEV  A ++ +G +L+GR +RV+
Sbjct: 122 IYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVN 164