BLASTX nr result

ID: Scutellaria24_contig00000490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000490
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]       168   5e-40
gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]       167   6e-40
gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]       166   2e-39
gb|ABB55369.1| histone deacetylase 2a-like [Solanum tuberosum]        162   3e-38
sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1; A...   162   3e-38

>gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]
          Length = 294

 Score =  168 bits (425), Expect = 5e-40
 Identities = 80/102 (78%), Positives = 89/102 (87%)
 Frame = +3

Query: 93  MEFWGVEVKCGEPLKVTPGDGMVLHLSQACLGELKNVKGNESVCMFVNVDGKKLVLGTLF 272
           MEFWG EVK GEPL V PGDGMVLHLSQA LGELK  K  +SVC+ VN+DGKKLVLGTL 
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKV-QSVCLSVNIDGKKLVLGTLN 59

Query: 273 TDKLPQQQFDLVFDSDFELSHNWKNGSVYFYGYRANNPFDED 398
           +DK+PQQQFDLVFD DFELSHNWKNGSVYF+GY+A NPF+E+
Sbjct: 60  SDKVPQQQFDLVFDRDFELSHNWKNGSVYFFGYKATNPFEEE 101


>gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]
          Length = 295

 Score =  167 bits (424), Expect = 6e-40
 Identities = 79/102 (77%), Positives = 89/102 (87%)
 Frame = +3

Query: 93  MEFWGVEVKCGEPLKVTPGDGMVLHLSQACLGELKNVKGNESVCMFVNVDGKKLVLGTLF 272
           MEFWG EVK GEPL V PGDGMVLHLSQA LGELK  K  +SVC+ VN+DGKKLVLGTL 
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKA-QSVCLSVNIDGKKLVLGTLS 59

Query: 273 TDKLPQQQFDLVFDSDFELSHNWKNGSVYFYGYRANNPFDED 398
           +DK+PQQQFDLVFD DFELSHNWK+GSVYF+GY+A NPF+E+
Sbjct: 60  SDKVPQQQFDLVFDRDFELSHNWKSGSVYFFGYKATNPFEEE 101


>gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]
          Length = 282

 Score =  166 bits (420), Expect = 2e-39
 Identities = 77/102 (75%), Positives = 86/102 (84%)
 Frame = +3

Query: 93  MEFWGVEVKCGEPLKVTPGDGMVLHLSQACLGELKNVKGNESVCMFVNVDGKKLVLGTLF 272
           MEFWG EVK G+PL V PGD MVLHLSQA LGE K  KG+E VC+ VNVDGKKL LGTL 
Sbjct: 1   MEFWGAEVKSGQPLTVQPGDDMVLHLSQASLGEAKKDKGSEPVCLSVNVDGKKLALGTLN 60

Query: 273 TDKLPQQQFDLVFDSDFELSHNWKNGSVYFYGYRANNPFDED 398
            DKLPQQQFDLVFD DFELSHNWKNGSVYF+GY+A NP++++
Sbjct: 61  LDKLPQQQFDLVFDRDFELSHNWKNGSVYFFGYKAANPYEQE 102


>gb|ABB55369.1| histone deacetylase 2a-like [Solanum tuberosum]
          Length = 203

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/102 (76%), Positives = 89/102 (87%)
 Frame = +3

Query: 93  MEFWGVEVKCGEPLKVTPGDGMVLHLSQACLGELKNVKGNESVCMFVNVDGKKLVLGTLF 272
           MEFWG EVK GEPL V PGDGMVLHLSQA LGELK  K +ESVC+ VN+DGKKLVLGTL 
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDK-SESVCLSVNIDGKKLVLGTLN 59

Query: 273 TDKLPQQQFDLVFDSDFELSHNWKNGSVYFYGYRANNPFDED 398
           ++K+PQQQFDLVFD DFELSHN K+GSVYF+GY+A NPF+E+
Sbjct: 60  SEKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEE 101


>sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1; AltName: Full=Histone
           deacetylase 2a; Short=HD2a; AltName: Full=ScHD2a
           gi|33667906|gb|AAQ24532.1| histone deacetylase [Solanum
           chacoense]
          Length = 269

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/102 (76%), Positives = 89/102 (87%)
 Frame = +3

Query: 93  MEFWGVEVKCGEPLKVTPGDGMVLHLSQACLGELKNVKGNESVCMFVNVDGKKLVLGTLF 272
           MEFWG EVK GEPL V PGDGMVLHLSQA LGELK  K +ESVC+ VN+DGKKLVLGTL 
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDK-SESVCLSVNIDGKKLVLGTLN 59

Query: 273 TDKLPQQQFDLVFDSDFELSHNWKNGSVYFYGYRANNPFDED 398
           ++K+PQQQFDLVFD DFELSHN K+GSVYF+GY+A NPF+E+
Sbjct: 60  SEKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEE 101


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