BLASTX nr result

ID: Scutellaria24_contig00000457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000457
         (1354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533251.1| chlorophyll A/B binding protein, putative [R...   439   e-121
ref|XP_002312019.1| light-harvesting complex I protein Lhca1 [Po...   438   e-120
ref|XP_002315298.1| light-harvesting complex I protein Lhca1 [Po...   436   e-120
ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6...   435   e-119
gb|AFK33642.1| unknown [Lotus japonicus]                              434   e-119

>ref|XP_002533251.1| chlorophyll A/B binding protein, putative [Ricinus communis]
            gi|223526931|gb|EEF29136.1| chlorophyll A/B binding
            protein, putative [Ricinus communis]
          Length = 244

 Score =  439 bits (1130), Expect = e-121
 Identities = 210/243 (86%), Positives = 225/243 (92%), Gaps = 1/243 (0%)
 Frame = -2

Query: 1329 MAANAVMSCGVAAAAVCPTVLSSSKSKFAASVTFG-TNATTSRFTMAANWMPGEPRPPYL 1153
            MA N +MSCG+A A   P++LSSSKSKFA+SV     N ++SR TM+A+WMPG+PRPPYL
Sbjct: 1    MATNTLMSCGIATAF--PSLLSSSKSKFASSVPLPCVNGSSSRITMSADWMPGQPRPPYL 58

Query: 1152 DGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 973
            DGSAPGDFGFDPLRLGEVPENLER+KESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW
Sbjct: 59   DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 118

Query: 972  AAVPGGQATYLGNPVPWGTLPTILVIEFLAIAFVEHQRSIEKDPEKKKYPGGAFDPLGYS 793
            AA+PGGQATYLG PVPWGTLPTILVIEFLAIAFVEHQRS+EKDPEKKKYPGGAFDPLGYS
Sbjct: 119  AAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 178

Query: 792  KDPKKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDILV 613
            KDP KF EYKVKEIKNGRLALLAFVG CVQQSAYPGTGPLENLATHLADPWHNNIGDI++
Sbjct: 179  KDPAKFHEYKVKEIKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIII 238

Query: 612  PPS 604
            P S
Sbjct: 239  PTS 241


>ref|XP_002312019.1| light-harvesting complex I protein Lhca1 [Populus trichocarpa]
            gi|222851839|gb|EEE89386.1| light-harvesting complex I
            protein Lhca1 [Populus trichocarpa]
          Length = 244

 Score =  438 bits (1126), Expect = e-120
 Identities = 206/239 (86%), Positives = 223/239 (93%)
 Frame = -2

Query: 1326 AANAVMSCGVAAAAVCPTVLSSSKSKFAASVTFGTNATTSRFTMAANWMPGEPRPPYLDG 1147
            A N +MSCG+A A   P++LSSSKSKFA+S+   +   TSR TM+A+W+PG+PRPPYLDG
Sbjct: 3    ATNTLMSCGIATAF--PSLLSSSKSKFASSIPLPSVNGTSRVTMSADWLPGQPRPPYLDG 60

Query: 1146 SAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAA 967
            SAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGIL+PEALGLGNWVKAQEWAA
Sbjct: 61   SAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILIPEALGLGNWVKAQEWAA 120

Query: 966  VPGGQATYLGNPVPWGTLPTILVIEFLAIAFVEHQRSIEKDPEKKKYPGGAFDPLGYSKD 787
             PGGQATYLG PVPWGTLPT+L IEF+AIAFVEHQRS+EKDPEKKKYPGGAFDPLG+SKD
Sbjct: 121  APGGQATYLGQPVPWGTLPTVLAIEFVAIAFVEHQRSMEKDPEKKKYPGGAFDPLGFSKD 180

Query: 786  PKKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDILVP 610
            PKKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+VP
Sbjct: 181  PKKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIVP 239


>ref|XP_002315298.1| light-harvesting complex I protein Lhca1 [Populus trichocarpa]
            gi|118489209|gb|ABK96411.1| unknown [Populus trichocarpa
            x Populus deltoides] gi|222864338|gb|EEF01469.1|
            light-harvesting complex I protein Lhca1 [Populus
            trichocarpa]
          Length = 243

 Score =  436 bits (1120), Expect = e-120
 Identities = 207/242 (85%), Positives = 222/242 (91%)
 Frame = -2

Query: 1329 MAANAVMSCGVAAAAVCPTVLSSSKSKFAASVTFGTNATTSRFTMAANWMPGEPRPPYLD 1150
            MA N +MSCG+A A   P++LSSSKSKFA+S+   +   TSR TM+ANWMPG+PRPPYLD
Sbjct: 1    MATNTLMSCGIATAF--PSLLSSSKSKFASSIPLPSVNGTSRVTMSANWMPGQPRPPYLD 58

Query: 1149 GSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWA 970
            GSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWA
Sbjct: 59   GSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWA 118

Query: 969  AVPGGQATYLGNPVPWGTLPTILVIEFLAIAFVEHQRSIEKDPEKKKYPGGAFDPLGYSK 790
            A PGGQATYLG PVPWGTLP IL IEF+AIAFVEHQRS+EKD EKKKYPGGAFDPLGYSK
Sbjct: 119  ATPGGQATYLGQPVPWGTLPIILAIEFVAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSK 178

Query: 789  DPKKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDILVP 610
            DP+KFEEYKVKEIKNGRLALLAFVG CVQQ+AYPGTGPLENLATHLADPWHNNIGD+L+P
Sbjct: 179  DPQKFEEYKVKEIKNGRLALLAFVGICVQQTAYPGTGPLENLATHLADPWHNNIGDVLIP 238

Query: 609  PS 604
             S
Sbjct: 239  RS 240


>ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
            [Cucumis sativus] gi|449525097|ref|XP_004169556.1|
            PREDICTED: chlorophyll a-b binding protein 6A,
            chloroplastic-like [Cucumis sativus]
          Length = 246

 Score =  435 bits (1119), Expect = e-119
 Identities = 209/242 (86%), Positives = 223/242 (92%), Gaps = 2/242 (0%)
 Frame = -2

Query: 1329 MAANAVMSCGVAAAAVCPTVLSSSKSKFAASVTFGTNAT--TSRFTMAANWMPGEPRPPY 1156
            MA+N +MSCG+A  A  P+VLSSSKSKFA  V     A   +SRF+M+A WMPG+PRPPY
Sbjct: 1    MASNTLMSCGIATTAF-PSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPY 59

Query: 1155 LDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVKAQE 976
            LDGSAPGDFGFDPL LGEVPENLER+KESELIHCRWAMLAVPGILVPEALGLGNWVKAQE
Sbjct: 60   LDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQE 119

Query: 975  WAAVPGGQATYLGNPVPWGTLPTILVIEFLAIAFVEHQRSIEKDPEKKKYPGGAFDPLGY 796
            WAAVPGGQATYLG PVPWGTLPTILVIEFLAIAFVEHQRS+EKDPEKKKYPGGAFDPLGY
Sbjct: 120  WAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY 179

Query: 795  SKDPKKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIL 616
            SKDP+K +EYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+
Sbjct: 180  SKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDII 239

Query: 615  VP 610
            +P
Sbjct: 240  IP 241


>gb|AFK33642.1| unknown [Lotus japonicus]
          Length = 241

 Score =  434 bits (1117), Expect = e-119
 Identities = 207/244 (84%), Positives = 227/244 (93%), Gaps = 3/244 (1%)
 Frame = -2

Query: 1329 MAANAVMSCGVAAAAVCPTVLSSSKSKFAASVT---FGTNATTSRFTMAANWMPGEPRPP 1159
            MA+N +MS  ++A    P++LSSSKS+FA +     FGTNA+ SRF+M A+WMPG+PRPP
Sbjct: 1    MASNTLMSSAISAF---PSLLSSSKSRFATAAPLSCFGTNAS-SRFSMTADWMPGQPRPP 56

Query: 1158 YLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 979
            YLDGSAPGDFGFDPLRLGEVPENLER+KESELIHCRWAMLAVPGILVPEALGLGNWVKAQ
Sbjct: 57   YLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQ 116

Query: 978  EWAAVPGGQATYLGNPVPWGTLPTILVIEFLAIAFVEHQRSIEKDPEKKKYPGGAFDPLG 799
            EWAA+PGGQATYLGNPVPWGTLPT+L IEFLAI+FVEHQRS+EKDPEKKKYPGGAFDPLG
Sbjct: 117  EWAALPGGQATYLGNPVPWGTLPTVLAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLG 176

Query: 798  YSKDPKKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI 619
            YSKDPKKF EYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIG++
Sbjct: 177  YSKDPKKFHEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNV 236

Query: 618  LVPP 607
            L+PP
Sbjct: 237  LIPP 240


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