BLASTX nr result

ID: Scutellaria24_contig00000261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000261
         (1400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG73415.1| chloroplast pigment-binding protein CP29 [Nicotia...   514   e-143
ref|XP_002528105.1| chlorophyll A/B binding protein, putative [R...   493   e-137
ref|XP_003516950.1| PREDICTED: chlorophyll a-b binding protein C...   493   e-137
ref|XP_003520609.1| PREDICTED: chlorophyll a-b binding protein C...   490   e-136
gb|ACO51068.1| chloroplast chlorophyll A-B binding protein [Goss...   488   e-135

>gb|ABG73415.1| chloroplast pigment-binding protein CP29 [Nicotiana tabacum]
          Length = 285

 Score =  514 bits (1324), Expect = e-143
 Identities = 251/283 (88%), Positives = 263/283 (92%), Gaps = 1/283 (0%)
 Frame = -3

Query: 1398 TAAAASSFIGTRLPDVHSGSGRVQARXXXXXXXXXXXXXXXFISDRPLWYPGAKAPEYLD 1219
            TAAA SSFIGTRLP++HSG+GRVQAR                I DRPLWYPGAKAPEYLD
Sbjct: 3    TAAATSSFIGTRLPEIHSGAGRVQARFGFGKKAAPKKAPKRQIPDRPLWYPGAKAPEYLD 62

Query: 1218 GTLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNLAGDIIGTRTEVADVKSTPFQPYSE 1039
            G+LVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKNLAGD+IGTRTE+ADVKSTPFQPYSE
Sbjct: 63   GSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTRTELADVKSTPFQPYSE 122

Query: 1038 VFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSIS 859
            VFGLQRFRECELIHGRWAMLATLGALTVEWLTG+TWQDAGKVELV+GSSYLGQPLPFSI+
Sbjct: 123  VFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSIT 182

Query: 858  TLIWIEVLVVGYI-EFQRNAELDPEKRLYPGGSYFDPLGLAADPEKKETLQLAEIKHARL 682
            TLIWIEVLV+GYI EFQRNAELDPEKRLYPGGS+FDPLGLAADPEKK TLQLAEIKHARL
Sbjct: 183  TLIWIEVLVIGYIVEFQRNAELDPEKRLYPGGSFFDPLGLAADPEKKATLQLAEIKHARL 242

Query: 681  AMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFGFFS 553
            AMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFGFFS
Sbjct: 243  AMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFGFFS 285


>ref|XP_002528105.1| chlorophyll A/B binding protein, putative [Ricinus communis]
            gi|223532494|gb|EEF34284.1| chlorophyll A/B binding
            protein, putative [Ricinus communis]
          Length = 285

 Score =  493 bits (1269), Expect = e-137
 Identities = 240/277 (86%), Positives = 252/277 (90%)
 Frame = -3

Query: 1395 AAAASSFIGTRLPDVHSGSGRVQARXXXXXXXXXXXXXXXFISDRPLWYPGAKAPEYLDG 1216
            AAAASSF+GTRLPDV+S SGRVQAR                 SDRPLWYPGAKAPE+LDG
Sbjct: 7    AAAASSFMGTRLPDVYSNSGRVQARFGFGTKKSAPKRSAKPTSDRPLWYPGAKAPEWLDG 66

Query: 1215 TLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNLAGDIIGTRTEVADVKSTPFQPYSEV 1036
            +LVGDYGFDPFGLGKPAEYLQ++LDSLDQNLAKN+AGDIIGTRTE ADVKSTPFQPYSEV
Sbjct: 67   SLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNIAGDIIGTRTEAADVKSTPFQPYSEV 126

Query: 1035 FGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSIST 856
            FGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELV+GSSYLGQPLPFSI+T
Sbjct: 127  FGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITT 186

Query: 855  LIWIEVLVVGYIEFQRNAELDPEKRLYPGGSYFDPLGLAADPEKKETLQLAEIKHARLAM 676
            LIWIEVLV+GYIEFQRN+ELDPEKRLYPGG +FDPLGLA DPEKK TLQLAEIKHARLAM
Sbjct: 187  LIWIEVLVIGYIEFQRNSELDPEKRLYPGGKFFDPLGLAEDPEKKATLQLAEIKHARLAM 246

Query: 675  VAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 565
            VAFLGFAVQAA TGKGPLNNWATHLSDPLHTTI D F
Sbjct: 247  VAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNF 283


>ref|XP_003516950.1| PREDICTED: chlorophyll a-b binding protein CP29.2, chloroplastic-like
            [Glycine max]
          Length = 290

 Score =  493 bits (1268), Expect = e-137
 Identities = 243/282 (86%), Positives = 255/282 (90%), Gaps = 4/282 (1%)
 Frame = -3

Query: 1398 TAAAASSFIGTRLPDVHSGSGRVQARXXXXXXXXXXXXXXXF----ISDRPLWYPGAKAP 1231
            TAAA SSF+GTRL + HSG+GRVQAR                     SDRPLWYPGAKAP
Sbjct: 5    TAAATSSFMGTRLLEAHSGAGRVQARFGFGKKKAAAPKKVSRGSGSSSDRPLWYPGAKAP 64

Query: 1230 EYLDGTLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNLAGDIIGTRTEVADVKSTPFQ 1051
            EYLDG+LVGDYGFDPFGLGKPAEYLQ++LDSLDQNLAKN+AGDIIGTRTE+ADVKSTPFQ
Sbjct: 65   EYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDIIGTRTELADVKSTPFQ 124

Query: 1050 PYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSSYLGQPLP 871
            PYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELV+GSSYLGQPLP
Sbjct: 125  PYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLP 184

Query: 870  FSISTLIWIEVLVVGYIEFQRNAELDPEKRLYPGGSYFDPLGLAADPEKKETLQLAEIKH 691
            FSI+TLIWIEVLV+GYIEFQRNAELDPEKRLYPGGSYFDPLGLA+DPEKK TLQLAEIKH
Sbjct: 185  FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKATLQLAEIKH 244

Query: 690  ARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 565
            ARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTF
Sbjct: 245  ARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 286


>ref|XP_003520609.1| PREDICTED: chlorophyll a-b binding protein CP29.2, chloroplastic-like
            [Glycine max]
          Length = 290

 Score =  490 bits (1261), Expect = e-136
 Identities = 242/282 (85%), Positives = 254/282 (90%), Gaps = 4/282 (1%)
 Frame = -3

Query: 1398 TAAAASSFIGTRLPDVHSGSGRVQARXXXXXXXXXXXXXXXFIS----DRPLWYPGAKAP 1231
            TAAA SSF+GTRL + HSG+GRV AR                 S    DRPLWYPGAKAP
Sbjct: 5    TAAATSSFMGTRLLEAHSGAGRVHARFGFGKKKAPAQKKASRGSGRDTDRPLWYPGAKAP 64

Query: 1230 EYLDGTLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNLAGDIIGTRTEVADVKSTPFQ 1051
            EYLDG+LVGDYGFDPFGLGKPAEYLQ++LDSLDQNLAKN+AGDIIGTRTE+ADVKSTPFQ
Sbjct: 65   EYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDIIGTRTELADVKSTPFQ 124

Query: 1050 PYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSSYLGQPLP 871
            PYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELV+GSSYLGQPLP
Sbjct: 125  PYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLP 184

Query: 870  FSISTLIWIEVLVVGYIEFQRNAELDPEKRLYPGGSYFDPLGLAADPEKKETLQLAEIKH 691
            FSI+TLIWIEVLV+GYIEFQRNAELDPEKRLYPGGSYFDPLGLA+DPEKK TLQLAEIKH
Sbjct: 185  FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKATLQLAEIKH 244

Query: 690  ARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 565
            ARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTF
Sbjct: 245  ARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 286


>gb|ACO51068.1| chloroplast chlorophyll A-B binding protein [Gossypium hirsutum]
          Length = 285

 Score =  488 bits (1255), Expect = e-135
 Identities = 237/277 (85%), Positives = 251/277 (90%)
 Frame = -3

Query: 1395 AAAASSFIGTRLPDVHSGSGRVQARXXXXXXXXXXXXXXXFISDRPLWYPGAKAPEYLDG 1216
            AAA SSF+GTR PDV++ SGR  AR                 SDRPLWYPGA AP++LDG
Sbjct: 7    AAATSSFMGTRFPDVYTSSGRFVARFGFGGKKAAPKKASKQTSDRPLWYPGAVAPDWLDG 66

Query: 1215 TLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNLAGDIIGTRTEVADVKSTPFQPYSEV 1036
            +LVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN+AG+IIGTRTEVADVK+TPFQPYSEV
Sbjct: 67   SLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNMAGEIIGTRTEVADVKATPFQPYSEV 126

Query: 1035 FGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSIST 856
            FGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELV+GSSYLGQPLPFS++T
Sbjct: 127  FGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSMTT 186

Query: 855  LIWIEVLVVGYIEFQRNAELDPEKRLYPGGSYFDPLGLAADPEKKETLQLAEIKHARLAM 676
            LIWIEVLV+G+IEFQRNAELDPEKRLYPGG YFDPLGLAADPEKK TLQLAEIKHARLAM
Sbjct: 187  LIWIEVLVIGFIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAM 246

Query: 675  VAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 565
            VAFLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTF
Sbjct: 247  VAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 283


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