BLASTX nr result

ID: Scutellaria24_contig00000248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000248
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF81446.1| NBS-NBS-LRR type disease resistance protein [Popu...    77   2e-12
ref|XP_002326568.1| cc-nbs-lrr resistance protein [Populus trich...    77   2e-12
ref|XP_002326567.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002326566.1| nbs-lrr resistance protein [Populus trichoca...    74   2e-11
ref|NP_001235671.1| NBS-LRR type disease resistance protein [Gly...    73   3e-11

>gb|ABF81446.1| NBS-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1997

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 47/101 (46%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
 Frame = +3

Query: 3    RSLRIDSVQEGVKLDIDYPVXXXXXXXXXXI-GSLERVPQWLPSLKSLTTLHLCWSRLRE 179
            R+L + S+ E   +D++Y            + G LER+P W+ SL SL  L L WSRLRE
Sbjct: 726  RALSVTSITESEVIDLEYLSSPPQFLQRLYLTGRLERLPDWILSLDSLVKLVLKWSRLRE 785

Query: 180  DPLESLQNLPNLSYLSIHGAYV-ERLSFKDEGFPKLKELWL 299
            DPL  LQNLPNL +L     Y  E L F +EGF KLK L L
Sbjct: 786  DPLLFLQNLPNLVHLEFIQVYSGEALHFSNEGFEKLKVLGL 826


>ref|XP_002326568.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|105922919|gb|ABF81444.1| NBS-LRR type disease
            resistance protein [Populus trichocarpa]
            gi|222833890|gb|EEE72367.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 974

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 47/101 (46%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
 Frame = +3

Query: 3    RSLRIDSVQEGVKLDIDYPVXXXXXXXXXXI-GSLERVPQWLPSLKSLTTLHLCWSRLRE 179
            R+L + S+ E   +D++Y            + G LER+P W+ SL SL  L L WSRLRE
Sbjct: 726  RALSVTSITESEVIDLEYLSSPPQFLQRLYLTGRLERLPDWILSLDSLVKLVLKWSRLRE 785

Query: 180  DPLESLQNLPNLSYLSIHGAYV-ERLSFKDEGFPKLKELWL 299
            DPL  LQNLPNL +L     Y  E L F +EGF KLK L L
Sbjct: 786  DPLLFLQNLPNLVHLEFIQVYSGEALHFSNEGFEKLKVLGL 826


>ref|XP_002326567.1| predicted protein [Populus trichocarpa] gi|222833889|gb|EEE72366.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
 Frame = +3

Query: 3   RSLRIDSVQEGVKLDIDYPVXXXXXXXXXXI-GSLERVPQWLPSLKSLTTLHLCWSRLRE 179
           R+L + SV+E   LD+++            + G LE +P W+P+L+SL  +HL WSRL+ 
Sbjct: 37  RALSLLSVEEDEILDLEHLFSPPPLLQRLYLTGRLETLPHWIPNLESLVRVHLKWSRLKG 96

Query: 180 DPLESLQNLPNLSYLSIHGAYV-ERLSFKDEGFPKLKEL 293
           DPLESLQ LPNL +L +   Y  + L FK  GF KLK L
Sbjct: 97  DPLESLQVLPNLVHLELLQVYEGDTLCFKVGGFKKLKLL 135


>ref|XP_002326566.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222833888|gb|EEE72365.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 916

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
 Frame = +3

Query: 3   RSLRIDSVQEGVKLDIDYPVXXXXXXXXXXI-GSLERVPQWLPSLKSLTTLHLCWSRLRE 179
           R+L + SV+E   LD+++            + G LE +P W+P+L+SL  +HL WSRL+ 
Sbjct: 701 RALSLLSVEEDEILDLEHLFSPPPLLQRLYLTGRLETLPHWIPNLESLVRVHLKWSRLKG 760

Query: 180 DPLESLQNLPNLSYLSIHGAYV-ERLSFKDEGFPKLKEL 293
           DPLESLQ LPNL +L +   Y  + L FK  GF KLK L
Sbjct: 761 DPLESLQVLPNLVHLELLQVYEGDTLCFKVGGFKKLKLL 799


>ref|NP_001235671.1| NBS-LRR type disease resistance protein [Glycine max]
            gi|223452621|gb|ACM89637.1| NBS-LRR type disease
            resistance protein [Glycine max]
          Length = 934

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 44/101 (43%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
 Frame = +3

Query: 3    RSLRIDSVQEGVKLDIDYPVXXXXXXXXXXIGS-LERVPQWLPSLKSLTTLHLCWSRLRE 179
            RSL I ++++   +DI              +G  L+  PQW+ SLK+L  + L WSRL E
Sbjct: 716  RSLSITAIEDDEIIDIHNIFRPPQYLQQLYLGGRLDNFPQWISSLKNLVRVFLKWSRLEE 775

Query: 180  DPLESLQNLPNLSYLSIHGAYV-ERLSFKDEGFPKLKELWL 299
            DPL  LQ+LPNL +L     YV E L FK +GFP LK L L
Sbjct: 776  DPLVHLQDLPNLRHLEFLQVYVGETLHFKAKGFPSLKVLGL 816


Top