BLASTX nr result

ID: Scutellaria24_contig00000168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000168
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170962.1| PREDICTED: chlorophyll a-b binding protein o...   453   e-125
ref|XP_004147416.1| PREDICTED: chlorophyll a-b binding protein 4...   453   e-125
ref|XP_004134608.1| PREDICTED: chlorophyll a-b binding protein o...   453   e-125
ref|XP_004134603.1| PREDICTED: chlorophyll a-b binding protein o...   453   e-125
ref|NP_001240146.1| chlorophyll a-b binding protein 21, chloropl...   453   e-125

>ref|XP_004170962.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like [Cucumis sativus]
          Length = 265

 Score =  453 bits (1165), Expect = e-125
 Identities = 216/222 (97%), Positives = 220/222 (99%)
 Frame = -1

Query: 669 ASTSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 490
           +S SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR
Sbjct: 44  SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 103

Query: 489 WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWAS 310
           WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA 
Sbjct: 104 WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 163

Query: 309 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFS 130
           QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA+DPEAFAELKVKELKNGRLAMFS
Sbjct: 164 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 223

Query: 129 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 4
           MFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 224 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265


>ref|XP_004147416.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
           [Cucumis sativus]
          Length = 265

 Score =  453 bits (1165), Expect = e-125
 Identities = 215/222 (96%), Positives = 220/222 (99%)
 Frame = -1

Query: 669 ASTSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 490
           +S SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR
Sbjct: 44  SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 103

Query: 489 WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWAS 310
           WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWAS
Sbjct: 104 WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAS 163

Query: 309 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFS 130
           QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA+DPEAFAELKVKELKNGRLAMFS
Sbjct: 164 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 223

Query: 129 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 4
           MFGFFVQAIVTGKGPLENLADHL DPVNNNAW+YATNFVPGK
Sbjct: 224 MFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK 265


>ref|XP_004134608.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like [Cucumis sativus]
          Length = 265

 Score =  453 bits (1165), Expect = e-125
 Identities = 216/222 (97%), Positives = 220/222 (99%)
 Frame = -1

Query: 669 ASTSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 490
           +S SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR
Sbjct: 44  SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 103

Query: 489 WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWAS 310
           WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA 
Sbjct: 104 WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 163

Query: 309 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFS 130
           QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA+DPEAFAELKVKELKNGRLAMFS
Sbjct: 164 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 223

Query: 129 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 4
           MFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 224 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265


>ref|XP_004134603.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like isoform 1 [Cucumis sativus]
           gi|449433638|ref|XP_004134604.1| PREDICTED: chlorophyll
           a-b binding protein of LHCII type I, chloroplastic-like
           isoform 2 [Cucumis sativus]
           gi|449433640|ref|XP_004134605.1| PREDICTED: chlorophyll
           a-b binding protein of LHCII type I, chloroplastic-like
           isoform 3 [Cucumis sativus]
          Length = 265

 Score =  453 bits (1165), Expect = e-125
 Identities = 216/222 (97%), Positives = 220/222 (99%)
 Frame = -1

Query: 669 ASTSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 490
           +S SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR
Sbjct: 44  SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 103

Query: 489 WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWAS 310
           WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA 
Sbjct: 104 WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAC 163

Query: 309 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFS 130
           QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA+DPEAFAELKVKELKNGRLAMFS
Sbjct: 164 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 223

Query: 129 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 4
           MFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 224 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265


>ref|NP_001240146.1| chlorophyll a-b binding protein 21, chloroplastic-like [Glycine
           max] gi|506629|gb|AAA50172.1| photosystem II type I
           chlorophyll a/b-binding protein [Glycine max]
           gi|255636158|gb|ACU18421.1| unknown [Glycine max]
          Length = 264

 Score =  453 bits (1165), Expect = e-125
 Identities = 214/222 (96%), Positives = 221/222 (99%)
 Frame = -1

Query: 669 ASTSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 490
           +S SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR
Sbjct: 43  SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 102

Query: 489 WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWAS 310
           WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+
Sbjct: 103 WAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAT 162

Query: 309 QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFS 130
           QV+LMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA+DPEAFAELKVKELKNGRLAMFS
Sbjct: 163 QVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 222

Query: 129 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 4
           MFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 223 MFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264


Top