BLASTX nr result

ID: Scutellaria24_contig00000149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000149
         (2163 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 pr...   450   e-124
ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein C...   446   e-122
ref|XP_002298178.1| light-harvesting complex II protein Lhcb6 [P...   445   e-122
gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotia...   444   e-122
ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein C...   442   e-121

>gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]
          Length = 258

 Score =  450 bits (1157), Expect = e-124
 Identities = 215/257 (83%), Positives = 235/257 (91%), Gaps = 3/257 (1%)
 Frame = -1

Query: 1995 ASTSAALVNGLGSTFLSGGKKSQALISAA---RVGTAAAPKRLFVVVAAVAPKKSWLPGV 1825
            A+TS A++NGLGS+FLSGG +SQ L++ +   +VG A +P+RL +VVAA APKKSW+PGV
Sbjct: 3    AATSGAVLNGLGSSFLSGGSRSQTLLATSIGGKVGVAVSPRRL-IVVAAAAPKKSWIPGV 61

Query: 1824 RGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA 1645
            RGGGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA
Sbjct: 62   RGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA 121

Query: 1644 WSGIPWFEAGAAPGAVAPFSFXXXXXXXXXLMGWVESKRWVDFFNPESQSVEWATPWSKT 1465
            WSG+PWFEAGA P A+APFSF         LMGWVESKRWVDFFNP+SQSVEWATPWSKT
Sbjct: 122  WSGVPWFEAGADPNAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWSKT 181

Query: 1464 AENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDSEKLERLKLAEIKHARLAMVAMLI 1285
            AENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPD+EKLERLKLAEIKHAR+AM+AMLI
Sbjct: 182  AENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLI 241

Query: 1284 FYFEAGQGKTPLGALGL 1234
            FYFEAGQGKTPLGALGL
Sbjct: 242  FYFEAGQGKTPLGALGL 258


>ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
            [Vitis vinifera] gi|147804704|emb|CAN71620.1|
            hypothetical protein VITISV_015544 [Vitis vinifera]
          Length = 257

 Score =  446 bits (1147), Expect = e-122
 Identities = 219/259 (84%), Positives = 234/259 (90%), Gaps = 4/259 (1%)
 Frame = -1

Query: 1998 MASTSAALVNGLGSTFLSGGKKSQALISA---ARVGTAA-APKRLFVVVAAVAPKKSWLP 1831
            MA+TSAA++NGLGS FL+GGK+SQ+L+SA   A+ G A  AP+RL VV AA  PKKSWLP
Sbjct: 1    MAATSAAVLNGLGSPFLTGGKRSQSLLSAGVAAKAGAAVPAPRRLIVVAAA--PKKSWLP 58

Query: 1830 GVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVG 1651
            GV+ GGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVG
Sbjct: 59   GVKAGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVG 118

Query: 1650 QAWSGIPWFEAGAAPGAVAPFSFXXXXXXXXXLMGWVESKRWVDFFNPESQSVEWATPWS 1471
            QAWSGIPWFEAGAAPGAVAPFSF         LMGWVESKRWVDFFNPESQSVEWATPWS
Sbjct: 119  QAWSGIPWFEAGAAPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWS 178

Query: 1470 KTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDSEKLERLKLAEIKHARLAMVAM 1291
            +TAENFANATGEQGYPGGKFFDPL  AGT+KDGVYIPD EKLERLKLAEIKHAR+AM+AM
Sbjct: 179  RTAENFANATGEQGYPGGKFFDPLSLAGTIKDGVYIPDVEKLERLKLAEIKHARIAMLAM 238

Query: 1290 LIFYFEAGQGKTPLGALGL 1234
            LIFYFEAGQGKTPLGALGL
Sbjct: 239  LIFYFEAGQGKTPLGALGL 257


>ref|XP_002298178.1| light-harvesting complex II protein Lhcb6 [Populus trichocarpa]
            gi|118486723|gb|ABK95197.1| unknown [Populus trichocarpa]
            gi|222845436|gb|EEE82983.1| light-harvesting complex II
            protein Lhcb6 [Populus trichocarpa]
          Length = 257

 Score =  445 bits (1144), Expect = e-122
 Identities = 215/257 (83%), Positives = 230/257 (89%), Gaps = 2/257 (0%)
 Frame = -1

Query: 1998 MASTSAALVNGLGSTFLSGGKKSQAL--ISAARVGTAAAPKRLFVVVAAVAPKKSWLPGV 1825
            MA+T+ A++NGLGS+FL GGK++QAL  I A+R G+     R  VVVAA  PKKSW+P V
Sbjct: 1    MAATAGAVLNGLGSSFLCGGKRNQALLGIGASRTGSFPVGTRKLVVVAAAQPKKSWIPAV 60

Query: 1824 RGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA 1645
            +GGG+LVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA
Sbjct: 61   KGGGSLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA 120

Query: 1644 WSGIPWFEAGAAPGAVAPFSFXXXXXXXXXLMGWVESKRWVDFFNPESQSVEWATPWSKT 1465
            WSGIPWFEAGA PGA+APFSF         LMGWVESKRWVDFFNPESQSVEWATPWSKT
Sbjct: 121  WSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSKT 180

Query: 1464 AENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDSEKLERLKLAEIKHARLAMVAMLI 1285
            AENFANATG+QGYPGGKFFDPLGFAGTLKDGVYIPD EKLERLK+AEIKHARLAMVAMLI
Sbjct: 181  AENFANATGDQGYPGGKFFDPLGFAGTLKDGVYIPDVEKLERLKVAEIKHARLAMVAMLI 240

Query: 1284 FYFEAGQGKTPLGALGL 1234
            FYFEAGQGKTPLGALGL
Sbjct: 241  FYFEAGQGKTPLGALGL 257


>gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotiana tabacum]
          Length = 257

 Score =  444 bits (1141), Expect = e-122
 Identities = 215/258 (83%), Positives = 231/258 (89%), Gaps = 3/258 (1%)
 Frame = -1

Query: 1998 MASTSAALVNGLGSTFLSGGKKSQALISA---ARVGTAAAPKRLFVVVAAVAPKKSWLPG 1828
            MA+TSAA++NGL S+FL+GGK SQAL+ A   AR+G  A PKR  +V AA APKKSW+P 
Sbjct: 1    MATTSAAVLNGLSSSFLTGGKNSQALLGAPVAARIGGLATPKRC-IVAAAAAPKKSWIPA 59

Query: 1827 VRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQ 1648
            V+GGGNL+DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQ
Sbjct: 60   VKGGGNLLDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQ 119

Query: 1647 AWSGIPWFEAGAAPGAVAPFSFXXXXXXXXXLMGWVESKRWVDFFNPESQSVEWATPWSK 1468
            AWSGIPWFEAGA PGA+APFSF         LMGWVESKRWVDFFNPESQSVEWATPWSK
Sbjct: 120  AWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSK 179

Query: 1467 TAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDSEKLERLKLAEIKHARLAMVAML 1288
            TAENFAN TGEQGYPGGKFFDPL  AGTL+DGVYIPD+EKLERLK+AEIKHARLAM+AML
Sbjct: 180  TAENFANFTGEQGYPGGKFFDPLSLAGTLQDGVYIPDTEKLERLKVAEIKHARLAMLAML 239

Query: 1287 IFYFEAGQGKTPLGALGL 1234
            IFYFEAGQGKTPLGALGL
Sbjct: 240  IFYFEAGQGKTPLGALGL 257


>ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
            [Glycine max]
          Length = 261

 Score =  442 bits (1136), Expect = e-121
 Identities = 214/260 (82%), Positives = 234/260 (90%), Gaps = 6/260 (2%)
 Frame = -1

Query: 1995 ASTSAALVNGLGSTFLSGGKKSQALISAA---RVGTAA---APKRLFVVVAAVAPKKSWL 1834
            A+TS A++NGLGS+FLSGG +SQ L++ A   +VG AA   +P+RL +VVAA APKKSWL
Sbjct: 3    AATSGAVLNGLGSSFLSGGNRSQTLLATAIGGKVGAAAVTVSPRRL-IVVAAAAPKKSWL 61

Query: 1833 PGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV 1654
            PGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV
Sbjct: 62   PGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV 121

Query: 1653 GQAWSGIPWFEAGAAPGAVAPFSFXXXXXXXXXLMGWVESKRWVDFFNPESQSVEWATPW 1474
            GQAWSG+PWFEAGA P A+APFSF         LMGWVESKRWVDFFNP+SQSVEWATPW
Sbjct: 122  GQAWSGVPWFEAGADPNAIAPFSFGTLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPW 181

Query: 1473 SKTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDSEKLERLKLAEIKHARLAMVA 1294
            S+T+ENFANATGEQGYPGGKFFDPL  AGT+KDGVYIPD+EKLERLKLAEIKHAR+AM+A
Sbjct: 182  SRTSENFANATGEQGYPGGKFFDPLSLAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLA 241

Query: 1293 MLIFYFEAGQGKTPLGALGL 1234
            MLIFYFEAGQGKTPLGALGL
Sbjct: 242  MLIFYFEAGQGKTPLGALGL 261


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