BLASTX nr result

ID: Scutellaria24_contig00000145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000145
         (1207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O49078.1|UCRIA_FRIAG RecName: Full=Cytochrome b6-f complex ir...   239   1e-60
gb|ACU14088.1| unknown [Glycine max]                                  237   4e-60
ref|XP_003543368.1| PREDICTED: cytochrome b6-f complex iron-sulf...   236   9e-60
gb|ACU20677.1| unknown [Glycine max]                                  236   9e-60
emb|CAM57108.1| Rieske iron-sulphur protein precursor [Pinellia ...   235   2e-59

>sp|O49078.1|UCRIA_FRIAG RecName: Full=Cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic; AltName:
           Full=Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein; AltName: Full=Rieske iron-sulfur
           protein; Short=ISP; Short=RISP; Flags: Precursor
           gi|2921504|gb|AAC04807.1| cytochrome B6-F complex
           iron-sulfur subunit precursor [Fritillaria agrestis]
          Length = 230

 Score =  239 bits (609), Expect = 1e-60
 Identities = 120/183 (65%), Positives = 128/183 (69%), Gaps = 7/183 (3%)
 Frame = +2

Query: 38  ASTALSAAITPSQLYSGKNGLNSASNFTLAKCVNGR-------RMKVSCMATSIPADRVP 196
           AST LSA  TPSQL + KNG  S S   L K   G          KV+C ATSIPADRVP
Sbjct: 2   ASTTLSATPTPSQLSAAKNGAYSPSRALLGKTARGLYPEKEMVSRKVTCQATSIPADRVP 61

Query: 197 DMGKREXXXXXXXXXXXXPTAGMLLPYTYFFVPPXXXXXXXXXXXKDALGNDVVANEWLK 376
           DMGKR+            PTAGML+PY  FFVPP           KDA+GND+VA  WLK
Sbjct: 62  DMGKRQTMNLLLLGALSLPTAGMLIPYGAFFVPPSSGGGGGGIVAKDAVGNDIVAAAWLK 121

Query: 377 NHGPGDRTLTQGLKGDPTYLVVENDRTLATYGINAVCTHLGCVVPWNKAENKFLCPCHGS 556
            HGPGDRTL QGL+GDPTYLVVENDR+LATYGINAVCTHLGCVVPWNKAENKFLCPCHGS
Sbjct: 122 THGPGDRTLAQGLRGDPTYLVVENDRSLATYGINAVCTHLGCVVPWNKAENKFLCPCHGS 181

Query: 557 QYN 565
           QYN
Sbjct: 182 QYN 184


>gb|ACU14088.1| unknown [Glycine max]
          Length = 227

 Score =  237 bits (605), Expect = 4e-60
 Identities = 118/182 (64%), Positives = 131/182 (71%), Gaps = 6/182 (3%)
 Frame = +2

Query: 38  ASTALSAAITPSQLYSGKNGLNSASNFTLAKCVN------GRRMKVSCMATSIPADRVPD 199
           AST LS   TPSQL SGK+G+ S S   L K V        + M+++C ATSIPADRVPD
Sbjct: 2   ASTTLSPT-TPSQLCSGKSGIFSPSQALLVKPVKRQMMGKSKGMRIACQATSIPADRVPD 60

Query: 200 MGKREXXXXXXXXXXXXPTAGMLLPYTYFFVPPXXXXXXXXXXXKDALGNDVVANEWLKN 379
           MGKR+            P+AGML+PYTYFFVPP           KDA+GNDV+A  WLK 
Sbjct: 61  MGKRQLMNLLLLGAISLPSAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLKA 120

Query: 380 HGPGDRTLTQGLKGDPTYLVVENDRTLATYGINAVCTHLGCVVPWNKAENKFLCPCHGSQ 559
           HGPGDRTL QGLKGDPTYLVVE DRTLATY INAVCTHLGCVVPWN+AENKF+CPCHGSQ
Sbjct: 121 HGPGDRTLAQGLKGDPTYLVVEKDRTLATYAINAVCTHLGCVVPWNQAENKFICPCHGSQ 180

Query: 560 YN 565
           YN
Sbjct: 181 YN 182


>ref|XP_003543368.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic-like [Glycine max]
          Length = 227

 Score =  236 bits (602), Expect = 9e-60
 Identities = 118/182 (64%), Positives = 132/182 (72%), Gaps = 6/182 (3%)
 Frame = +2

Query: 38  ASTALSAAITPSQLYSGKNGLNSASNFTLAKCVNGRRM------KVSCMATSIPADRVPD 199
           AST LS   TPSQL SGK+G+ S+S   L K V  + M      +++C ATSI ADRVPD
Sbjct: 2   ASTTLSPT-TPSQLCSGKSGIFSSSQALLVKPVKRQMMGKSKGLRIACQATSISADRVPD 60

Query: 200 MGKREXXXXXXXXXXXXPTAGMLLPYTYFFVPPXXXXXXXXXXXKDALGNDVVANEWLKN 379
           MGKR+            PTAGML+PYTYFFVPP           KDA+GNDV+A  WLK 
Sbjct: 61  MGKRQLMNLLLLGAISLPTAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLKA 120

Query: 380 HGPGDRTLTQGLKGDPTYLVVENDRTLATYGINAVCTHLGCVVPWNKAENKFLCPCHGSQ 559
           HGPGDRTLTQGLKGDPTYLVVE DRTLAT+ INAVCTHLGCVVPWN+AENKF+CPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPWNQAENKFICPCHGSQ 180

Query: 560 YN 565
           YN
Sbjct: 181 YN 182


>gb|ACU20677.1| unknown [Glycine max]
          Length = 262

 Score =  236 bits (602), Expect = 9e-60
 Identities = 118/182 (64%), Positives = 132/182 (72%), Gaps = 6/182 (3%)
 Frame = +2

Query: 38  ASTALSAAITPSQLYSGKNGLNSASNFTLAKCVNGRRM------KVSCMATSIPADRVPD 199
           AST LS   TPSQL SGK+G+ S+S   L K V  + M      +++C ATSI ADRVPD
Sbjct: 2   ASTTLSPT-TPSQLCSGKSGIFSSSQALLVKPVKRQMMGKSKGLRIACQATSISADRVPD 60

Query: 200 MGKREXXXXXXXXXXXXPTAGMLLPYTYFFVPPXXXXXXXXXXXKDALGNDVVANEWLKN 379
           MGKR+            PTAGML+PYTYFFVPP           KDA+GNDV+A  WLK 
Sbjct: 61  MGKRQLMNLLLLGAISLPTAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLKA 120

Query: 380 HGPGDRTLTQGLKGDPTYLVVENDRTLATYGINAVCTHLGCVVPWNKAENKFLCPCHGSQ 559
           HGPGDRTLTQGLKGDPTYLVVE DRTLAT+ INAVCTHLGCVVPWN+AENKF+CPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPWNQAENKFICPCHGSQ 180

Query: 560 YN 565
           YN
Sbjct: 181 YN 182


>emb|CAM57108.1| Rieske iron-sulphur protein precursor [Pinellia ternata]
          Length = 226

 Score =  235 bits (599), Expect = 2e-59
 Identities = 119/180 (66%), Positives = 128/180 (71%), Gaps = 4/180 (2%)
 Frame = +2

Query: 38  ASTALSAAITPSQLYSGKNGLNSASNFTLAKCVNG----RRMKVSCMATSIPADRVPDMG 205
           AST LS A  PSQL SGKN + + S   L K   G    R  + +CMATSI ADRVPDMG
Sbjct: 2   ASTPLSTAAAPSQLASGKNCVFAPSRGLLCKVPKGLGLGRGERATCMATSISADRVPDMG 61

Query: 206 KREXXXXXXXXXXXXPTAGMLLPYTYFFVPPXXXXXXXXXXXKDALGNDVVANEWLKNHG 385
           KR+            P+AGML+PY  FFVPP           KDALGNDVVA EWLK HG
Sbjct: 62  KRQLMNLLLLGTLSLPSAGMLIPYAAFFVPPGTGGGGGGIVAKDALGNDVVAAEWLKTHG 121

Query: 386 PGDRTLTQGLKGDPTYLVVENDRTLATYGINAVCTHLGCVVPWNKAENKFLCPCHGSQYN 565
           P DRTLTQGLKGDPTYLVVE+DRTLATYGINAVCTHLGCVVPWN AENKF+CPCHGSQYN
Sbjct: 122 PNDRTLTQGLKGDPTYLVVESDRTLATYGINAVCTHLGCVVPWNTAENKFICPCHGSQYN 181


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