BLASTX nr result

ID: Scutellaria24_contig00000118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000118
         (1599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote...   210   7e-52
ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|2...   188   3e-45
ref|XP_002532469.1| double-stranded RNA binding protein, putativ...   167   9e-39
ref|XP_004161611.1| PREDICTED: uncharacterized LOC101213863 [Cuc...   152   2e-34
ref|XP_004149792.1| PREDICTED: uncharacterized protein LOC101213...   152   2e-34

>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4-like [Vitis
            vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
            product [Vitis vinifera]
          Length = 333

 Score =  210 bits (535), Expect = 7e-52
 Identities = 111/185 (60%), Positives = 138/185 (74%), Gaps = 2/185 (1%)
 Frame = -3

Query: 1474 VPEEVWSKNRLQQYAQRASLPLPVYQTVFDGSPQAPTFKSRVWVDGTCFASPNSFSTRKM 1295
            +PE +  KNRLQ+Y QR+++PLP+YQTV +G   AP F+S V VDG  + SPN+FS RK 
Sbjct: 17   LPEHLMHKNRLQEYTQRSAIPLPIYQTVNEGFQHAPKFRSTVLVDGATYTSPNTFSHRKA 76

Query: 1294 AEQDAARHALIGIREKVKIEGPSSILQDTRFCKSIISEYAVKMNL-TPTYVTNQSVAMLP 1118
            AEQD AR AL  I +K+K EG   I +DT FCKSI++E+AVKMNL  PTY T Q   +LP
Sbjct: 77   AEQDVARLALEFISKKIKDEGCPLIREDTVFCKSILNEFAVKMNLEKPTYTTVQPEGLLP 136

Query: 1117 IFVSSLVLNGVAYVGDAGRNKREAEQFAARSAIISIL-DSESNTTMSEIVKSKFRFYEAL 941
            +FVSSLV NGV Y GDAGRNK+EAEQ AAR+ I+SIL +S S T +SEI+KSK + Y AL
Sbjct: 137  VFVSSLVFNGVTYTGDAGRNKKEAEQLAARTVILSILGNSGSGTLLSEIIKSKVKLYAAL 196

Query: 940  QKVKD 926
             +VKD
Sbjct: 197  HRVKD 201


>ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|222844689|gb|EEE82236.1|
            predicted protein [Populus trichocarpa]
          Length = 452

 Score =  188 bits (478), Expect = 3e-45
 Identities = 99/186 (53%), Positives = 134/186 (72%), Gaps = 2/186 (1%)
 Frame = -3

Query: 1477 GVPEEVWSKNRLQQYAQRASLPLPVYQTVFDGSPQAPTFKSRVWVDGTCFASPNSFSTRK 1298
            G+P+ +  KNRLQ+Y Q++SL LPVYQT+ +G    P F+S VWVDG  + S  +F  RK
Sbjct: 133  GLPDNLMYKNRLQEYTQKSSLQLPVYQTLNEGPAHMPRFRSTVWVDGARYRSQKTFLHRK 192

Query: 1297 MAEQDAARHALIGIREKVKIEGPSSILQDTRFCKSIISEYAVKMNL-TPTYVTNQSVAML 1121
             AEQD A  AL  I ++VK EG   +L DT FCKSI++E+AVK+N   PTY T QS  +L
Sbjct: 193  AAEQDVANLALESILKRVKDEGCPLLLGDTVFCKSILNEFAVKVNREKPTYNTVQSPGLL 252

Query: 1120 PIFVSSLVLNGVAYVGDAGRNKREAEQFAARSAIISIL-DSESNTTMSEIVKSKFRFYEA 944
            P+F+S+LV +GV+Y GDAGRNK+EAEQ AAR+ I+S++ +S S+  + EI+KSK + Y A
Sbjct: 253  PVFISTLVFDGVSYTGDAGRNKKEAEQLAARAVILSLIGNSGSSKILYEIIKSKSKLYAA 312

Query: 943  LQKVKD 926
            L +VKD
Sbjct: 313  LDRVKD 318


>ref|XP_002532469.1| double-stranded RNA binding protein, putative [Ricinus communis]
            gi|223527827|gb|EEF29925.1| double-stranded RNA binding
            protein, putative [Ricinus communis]
          Length = 289

 Score =  167 bits (422), Expect = 9e-39
 Identities = 96/183 (52%), Positives = 120/183 (65%), Gaps = 4/183 (2%)
 Frame = -3

Query: 1471 PEEVWSKNRLQQYAQRASLPLPVYQTVFDGSPQAPTFKSRVWVDGTCFASPNSFSTRKMA 1292
            PE +  KNRLQ+Y QR SL LP+YQTV +G P  P F+S V VDG  + S N+FS RK A
Sbjct: 9    PEHLMYKNRLQEYTQRQSLQLPIYQTVNEGYPHDPKFRSTVLVDGEEYTSHNTFSHRKEA 68

Query: 1291 EQDAARHALIGIREKVK--IEGPSSILQDTRFCKSIISEYAVKMNL-TPTYVTNQSVAML 1121
            EQD A+ AL  I EK+K  I+      +DT  CKSI++EYAVKM L  PTY T +   + 
Sbjct: 69   EQDVAKLALTSITEKIKDEIKDEKFTHEDTVACKSILNEYAVKMQLEMPTYNTVKQGGLF 128

Query: 1120 PIFVSSLVLNGVAYVGDAGRNKREAEQFAARSAIISIL-DSESNTTMSEIVKSKFRFYEA 944
            PIFVSS V NGV Y GD GR K+EAEQ AAR+A++S+L + ES   +S+  KSK + Y  
Sbjct: 129  PIFVSSSVFNGVTYNGDIGRTKKEAEQLAARAAVLSLLRNVESGEIISKFFKSKRKLYVG 188

Query: 943  LQK 935
              K
Sbjct: 189  FHK 191


>ref|XP_004161611.1| PREDICTED: uncharacterized LOC101213863 [Cucumis sativus]
          Length = 385

 Score =  152 bits (384), Expect = 2e-34
 Identities = 82/181 (45%), Positives = 112/181 (61%), Gaps = 5/181 (2%)
 Frame = -3

Query: 1453 KNRLQQYAQRASLPLPVYQTVFDGSPQAPTFKSRVWVDGTCFASPNSFSTRKMAEQDAAR 1274
            KN L +Y Q+A + +PVYQT+ +GSP  P ++S V VD   + SPN+F  R+ AEQDAAR
Sbjct: 79   KNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHYVSPNTFRNRRAAEQDAAR 138

Query: 1273 HALIGIREKVKIEGPSSILQDTRFCKSIISEYAVKMNL-TPTYVTNQSVAMLPIFVSSLV 1097
             A   I +K K +    + +D   CKSI+SEY  KM L  P Y T  +   +  F S+LV
Sbjct: 139  VAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLV 198

Query: 1096 LNGVAYVGDAGRNKREAEQFAARSAIISILDSESN----TTMSEIVKSKFRFYEALQKVK 929
             +GV Y  D GR K+EAEQ AAR+AI+S+ +  +N      + +I+ SK RF+  LQKVK
Sbjct: 199  FDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKALGDIIASKVRFHAMLQKVK 258

Query: 928  D 926
            D
Sbjct: 259  D 259


>ref|XP_004149792.1| PREDICTED: uncharacterized protein LOC101213863 [Cucumis sativus]
          Length = 385

 Score =  152 bits (384), Expect = 2e-34
 Identities = 82/181 (45%), Positives = 112/181 (61%), Gaps = 5/181 (2%)
 Frame = -3

Query: 1453 KNRLQQYAQRASLPLPVYQTVFDGSPQAPTFKSRVWVDGTCFASPNSFSTRKMAEQDAAR 1274
            KN L +Y Q+A + +PVYQT+ +GSP  P ++S V VD   + SPN+F  R+ AEQDAAR
Sbjct: 79   KNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHYVSPNTFRNRRAAEQDAAR 138

Query: 1273 HALIGIREKVKIEGPSSILQDTRFCKSIISEYAVKMNL-TPTYVTNQSVAMLPIFVSSLV 1097
             A   I +K K +    + +D   CKSI+SEY  KM L  P Y T  +   +  F S+LV
Sbjct: 139  VAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQSTLV 198

Query: 1096 LNGVAYVGDAGRNKREAEQFAARSAIISILDSESN----TTMSEIVKSKFRFYEALQKVK 929
             +GV Y  D GR K+EAEQ AAR+AI+S+ +  +N      + +I+ SK RF+  LQKVK
Sbjct: 199  FDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKALGDIIASKVRFHAMLQKVK 258

Query: 928  D 926
            D
Sbjct: 259  D 259


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