BLASTX nr result

ID: Scutellaria24_contig00000116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000116
         (1552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCG06554.1| E3 ubiquitin ligase [Lotus japonicus]                 591   e-166
ref|XP_002318423.1| predicted protein [Populus trichocarpa] gi|2...   588   e-165
ref|XP_003588519.1| Ubiquitin ligase SINAT3 [Medicago truncatula...   587   e-165
ref|XP_002321406.1| predicted protein [Populus trichocarpa] gi|1...   584   e-164
ref|XP_002267317.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   584   e-164

>emb|CCG06554.1| E3 ubiquitin ligase [Lotus japonicus]
          Length = 324

 Score =  591 bits (1524), Expect = e-166
 Identities = 279/321 (86%), Positives = 292/321 (90%), Gaps = 9/321 (2%)
 Frame = +3

Query: 294  SIECISSIDGMDEDEISHPNPFSQFSFSKP----SHNNNGGV----VNPPTSVHELLECP 449
            SIEC+SS DGMDEDEI H +  S+FS +K      +NNN  +    + P TSVHELLECP
Sbjct: 5    SIECVSSSDGMDEDEI-HAHHHSEFSSTKARNGGGNNNNAAMGPTAITPATSVHELLECP 63

Query: 450  VCTNSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYC 629
            VCTNSMYPPIHQCHNGHTLCSTCK RVHNRCPTCRQELGDIRCLALEKVAESLELPCKY 
Sbjct: 64   VCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYY 123

Query: 630  SLGCPEIFPYYSKLKHEAICNFRPYTCPYAGSECSVVGDIPFLVTHLRDDHKVDMHSGCT 809
            SLGCPEIFPYYSKLKHE ICNFRPY+CPYAGSECSVVGDIPFLV HLRDDHKVDMH+GCT
Sbjct: 124  SLGCPEIFPYYSKLKHETICNFRPYSCPYAGSECSVVGDIPFLVAHLRDDHKVDMHTGCT 183

Query: 810  FNHRYVKSNPRDVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEMDARN 989
            FNHRYVKSNPR+VENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE +ARN
Sbjct: 184  FNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARN 243

Query: 990  YSYSLEVGGNGRKLIWEGTPRSIRDGHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVT 1169
            YSYSLEVG NGRKLIWEGTPRS+RD HRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVT
Sbjct: 244  YSYSLEVGANGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVT 303

Query: 1170 GRIWKEQQNPE-GTCIPNLCS 1229
            GRIWKEQQNP+ G CIPNLCS
Sbjct: 304  GRIWKEQQNPDAGVCIPNLCS 324


>ref|XP_002318423.1| predicted protein [Populus trichocarpa] gi|222859096|gb|EEE96643.1|
            predicted protein [Populus trichocarpa]
          Length = 332

 Score =  588 bits (1516), Expect = e-165
 Identities = 279/328 (85%), Positives = 291/328 (88%), Gaps = 16/328 (4%)
 Frame = +3

Query: 294  SIECISSIDGMDEDEISHPN----PFSQFSFSKPSH--NNNGGVVN---------PPTSV 428
            +IEC+SS DG+DEDEI H N       QF+  KP +  NN+ G+ N         P TSV
Sbjct: 5    NIECVSSSDGLDEDEIHHHNLQHHHLHQFASPKPHNVNNNSNGIANVVGGPTVIAPATSV 64

Query: 429  HELLECPVCTNSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESL 608
            HELLECPVCTNSMYPPIHQCHNGHTLCSTCK RV NRCPTCRQELGDIRCLALEKVAESL
Sbjct: 65   HELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESL 124

Query: 609  ELPCKYCSLGCPEIFPYYSKLKHEAICNFRPYTCPYAGSECSVVGDIPFLVTHLRDDHKV 788
            ELPCKY +LGCPEIFPYYSKLKHEAICNFRPY CPYAGSECSVVGDIPFLV HLRDDHKV
Sbjct: 125  ELPCKYYNLGCPEIFPYYSKLKHEAICNFRPYNCPYAGSECSVVGDIPFLVAHLRDDHKV 184

Query: 789  DMHSGCTFNHRYVKSNPRDVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMG 968
            DMH GCTFNHRYVKSNPR+VENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMG
Sbjct: 185  DMHIGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMG 244

Query: 969  DEMDARNYSYSLEVGGNGRKLIWEGTPRSIRDGHRKVRDSHDGLIIQRNMALFFSGGDRK 1148
            DE +ARNYSYSLEVGGNGRKLIWEGTPRS+RD HRKVRDSHDGLIIQRNMALFFSGGDRK
Sbjct: 245  DEAEARNYSYSLEVGGNGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRK 304

Query: 1149 ELKLRVTGRIWKEQQNPE-GTCIPNLCS 1229
            ELKLRVTGRIWKEQQ+PE G CIPNLCS
Sbjct: 305  ELKLRVTGRIWKEQQSPETGVCIPNLCS 332


>ref|XP_003588519.1| Ubiquitin ligase SINAT3 [Medicago truncatula]
            gi|158516792|gb|ABW70159.1| SINA1 [Medicago truncatula]
            gi|355477567|gb|AES58770.1| Ubiquitin ligase SINAT3
            [Medicago truncatula]
          Length = 333

 Score =  587 bits (1514), Expect = e-165
 Identities = 281/329 (85%), Positives = 290/329 (88%), Gaps = 17/329 (5%)
 Frame = +3

Query: 294  SIECISSIDGMDEDEISHP---------NPFSQFSFSKPSH--NNNGGVVN-----PPTS 425
            SIEC+SS DGMDEDEI H          +  S+FS  KP    NNN GV+      P TS
Sbjct: 5    SIECVSSSDGMDEDEIQHRILHPHHQQHHHHSEFSSLKPRSGGNNNHGVIGSTAIAPATS 64

Query: 426  VHELLECPVCTNSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAES 605
            VHELLECPVCTNSMYPPIHQCHNGHTLCSTCK RVHNRCPTCRQELGDIRCLALEKVAES
Sbjct: 65   VHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAES 124

Query: 606  LELPCKYCSLGCPEIFPYYSKLKHEAICNFRPYTCPYAGSECSVVGDIPFLVTHLRDDHK 785
            LELPCKY SLGCPEIFPYYSKLKHE ICNFRPYTCPYAGSECS VGDI FLV HLRDDHK
Sbjct: 125  LELPCKYYSLGCPEIFPYYSKLKHETICNFRPYTCPYAGSECSAVGDINFLVAHLRDDHK 184

Query: 786  VDMHSGCTFNHRYVKSNPRDVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFM 965
            VDMH+GCTFNHRYVKSNPR+VENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFM
Sbjct: 185  VDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFM 244

Query: 966  GDEMDARNYSYSLEVGGNGRKLIWEGTPRSIRDGHRKVRDSHDGLIIQRNMALFFSGGDR 1145
            GDE +ARNY+YSLEVG NGRKLIWEGTPRSIRD HRKVRDSHDGLIIQRNMALFFSGGDR
Sbjct: 245  GDENEARNYTYSLEVGANGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDR 304

Query: 1146 KELKLRVTGRIWKEQQNPE-GTCIPNLCS 1229
            KELKLRVTGRIWKEQQNP+ G CIPNLCS
Sbjct: 305  KELKLRVTGRIWKEQQNPDGGVCIPNLCS 333


>ref|XP_002321406.1| predicted protein [Populus trichocarpa] gi|118486267|gb|ABK94975.1|
            unknown [Populus trichocarpa] gi|222868402|gb|EEF05533.1|
            predicted protein [Populus trichocarpa]
          Length = 332

 Score =  584 bits (1505), Expect = e-164
 Identities = 276/328 (84%), Positives = 291/328 (88%), Gaps = 16/328 (4%)
 Frame = +3

Query: 294  SIECISSIDGMDEDEISHPN---PFSQFSFSKP-----SHNNNGGVV-------NPPTSV 428
            +IEC+SS DG+DEDEI H N      QF+ SKP     +HNN   +V        P TSV
Sbjct: 5    NIECVSSSDGLDEDEIHHHNLQHHLHQFASSKPHNVNNNHNNGNTIVVGGPTAIAPATSV 64

Query: 429  HELLECPVCTNSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESL 608
            HELLECPVCTNSMYPPIHQCHNGHTLCSTCK RV NRCPTCRQELGDIRCLALEKVAESL
Sbjct: 65   HELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESL 124

Query: 609  ELPCKYCSLGCPEIFPYYSKLKHEAICNFRPYTCPYAGSECSVVGDIPFLVTHLRDDHKV 788
            E PCK+ +LGCPEIFPYYSKLKHEAICNFRPY CPYAGSECSVVGDIPFLVTHLRDDHKV
Sbjct: 125  EFPCKFYNLGCPEIFPYYSKLKHEAICNFRPYNCPYAGSECSVVGDIPFLVTHLRDDHKV 184

Query: 789  DMHSGCTFNHRYVKSNPRDVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMG 968
            DMH+GCTFNHRYVKSNPR+VENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMG
Sbjct: 185  DMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMG 244

Query: 969  DEMDARNYSYSLEVGGNGRKLIWEGTPRSIRDGHRKVRDSHDGLIIQRNMALFFSGGDRK 1148
            DE +ARNY+YSLEVGG+GRKL WEGTP+S+RD HRKVRDSHDGLIIQRNMALFFSGGDRK
Sbjct: 245  DETEARNYTYSLEVGGHGRKLTWEGTPQSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRK 304

Query: 1149 ELKLRVTGRIWKEQQNPE-GTCIPNLCS 1229
            ELKLRVTGRIWKEQQNPE G CIPNLCS
Sbjct: 305  ELKLRVTGRIWKEQQNPETGVCIPNLCS 332


>ref|XP_002267317.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5 [Vitis vinifera]
            gi|297742353|emb|CBI34502.3| unnamed protein product
            [Vitis vinifera]
          Length = 316

 Score =  584 bits (1505), Expect = e-164
 Identities = 273/314 (86%), Positives = 290/314 (92%), Gaps = 2/314 (0%)
 Frame = +3

Query: 294  SIECISSIDGMDEDEISHPNPFSQFSFSKPSHNNN-GGVVNPPTSVHELLECPVCTNSMY 470
            SIEC+SS DG+ E+EI H +   QFS S   H+N     ++P TSVHELLECPVCTNSMY
Sbjct: 5    SIECVSSTDGIYEEEIHHHH--HQFSSSSKPHSNVVSPAISPATSVHELLECPVCTNSMY 62

Query: 471  PPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPEI 650
            PPIHQCHNGHTLCSTCK RVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPEI
Sbjct: 63   PPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPEI 122

Query: 651  FPYYSKLKHEAICNFRPYTCPYAGSECSVVGDIPFLVTHLRDDHKVDMHSGCTFNHRYVK 830
            FPYYSKLKHEA CNFRPY CPYAGSEC+VVGDIPFLV+HLRDDHKVDMH+GCTFNHRYVK
Sbjct: 123  FPYYSKLKHEAQCNFRPYNCPYAGSECAVVGDIPFLVSHLRDDHKVDMHTGCTFNHRYVK 182

Query: 831  SNPRDVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEMDARNYSYSLEV 1010
            SNPR+VENATWMLTVF+CFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE++ARN+SYSLEV
Sbjct: 183  SNPREVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEIEARNFSYSLEV 242

Query: 1011 GGNGRKLIWEGTPRSIRDGHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 1190
            G NGRKLIWEGTPRSIRD H+KVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ
Sbjct: 243  GANGRKLIWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 302

Query: 1191 QNPE-GTCIPNLCS 1229
            QNP+ G CIPNLCS
Sbjct: 303  QNPDAGVCIPNLCS 316


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