BLASTX nr result

ID: Scutellaria24_contig00000112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000112
         (1184 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, pu...   312   1e-82
ref|XP_002276502.1| PREDICTED: splicing factor U2af small subuni...   311   2e-82
ref|XP_004145565.1| PREDICTED: splicing factor U2af small subuni...   311   2e-82
dbj|BAJ34257.1| unnamed protein product [Thellungiella halophila]     310   3e-82
ref|XP_002300614.1| predicted protein [Populus trichocarpa] gi|2...   309   1e-81

>ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis]
            gi|223551442|gb|EEF52928.1| U2 snrnp auxiliary factor,
            small subunit, putative [Ricinus communis]
          Length = 272

 Score =  312 bits (799), Expect = 1e-82
 Identities = 152/185 (82%), Positives = 163/185 (88%)
 Frame = -3

Query: 1182 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPQKIQXXXX 1003
            FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDP+KIQ    
Sbjct: 20   FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFE 79

Query: 1002 XXXXXXXXXLTKFGEIESLSVCDNLADHMIGNVYAQFKEEDQAAAALNALQGRFYSGRPI 823
                     L KFGEIESL+VCDNLADHMIGNVY QF+EEDQAAAAL ALQGRFYSGRPI
Sbjct: 80   DFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPI 139

Query: 822  IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKTIGRELKRKLYGRHHGRFWGTRSNS 643
            IADFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK IGR+L+RKL+GR+ G +  +RS S
Sbjct: 140  IADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRRKLFGRYRG-YRASRSRS 198

Query: 642  RSVSP 628
            RSVSP
Sbjct: 199  RSVSP 203


>ref|XP_002276502.1| PREDICTED: splicing factor U2af small subunit B isoform 1 [Vitis
            vinifera] gi|359491881|ref|XP_003634337.1| PREDICTED:
            splicing factor U2af small subunit B isoform 2 [Vitis
            vinifera]
          Length = 272

 Score =  311 bits (798), Expect = 2e-82
 Identities = 152/187 (81%), Positives = 164/187 (87%)
 Frame = -3

Query: 1182 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPQKIQXXXX 1003
            FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDP+KIQ    
Sbjct: 20   FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFE 79

Query: 1002 XXXXXXXXXLTKFGEIESLSVCDNLADHMIGNVYAQFKEEDQAAAALNALQGRFYSGRPI 823
                     L KFGEIESL+VCDNLADHMIGNVY QFKEE+QAAAAL ALQGRFYSGRPI
Sbjct: 80   DFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEEEQAAAALQALQGRFYSGRPI 139

Query: 822  IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKTIGRELKRKLYGRHHGRFWGTRSNS 643
            IADFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK IGR+L+RKL+GR+ G +  +RS S
Sbjct: 140  IADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRRKLFGRYSG-YGRSRSRS 198

Query: 642  RSVSPPY 622
            RS+SP Y
Sbjct: 199  RSLSPRY 205


>ref|XP_004145565.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
            sativus] gi|449485076|ref|XP_004157064.1| PREDICTED:
            splicing factor U2af small subunit B-like [Cucumis
            sativus]
          Length = 276

 Score =  311 bits (797), Expect = 2e-82
 Identities = 151/185 (81%), Positives = 163/185 (88%)
 Frame = -3

Query: 1182 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPQKIQXXXX 1003
            FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDP+KIQ    
Sbjct: 20   FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFE 79

Query: 1002 XXXXXXXXXLTKFGEIESLSVCDNLADHMIGNVYAQFKEEDQAAAALNALQGRFYSGRPI 823
                     L KFGEIESL+VCDNLADHMIGNVY QF+EEDQAAAAL ALQGRFYSGRPI
Sbjct: 80   DFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPI 139

Query: 822  IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKTIGRELKRKLYGRHHGRFWGTRSNS 643
            IADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK IG++L+RKL+GR+ G +  +RS S
Sbjct: 140  IADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRG-YRASRSRS 198

Query: 642  RSVSP 628
            RS+SP
Sbjct: 199  RSLSP 203


>dbj|BAJ34257.1| unnamed protein product [Thellungiella halophila]
          Length = 308

 Score =  310 bits (795), Expect = 3e-82
 Identities = 150/186 (80%), Positives = 162/186 (87%), Gaps = 1/186 (0%)
 Frame = -3

Query: 1182 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPQKIQXXXX 1003
            FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP+DP+KIQ    
Sbjct: 20   FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPLDPRKIQEHFE 79

Query: 1002 XXXXXXXXXLTKFGEIESLSVCDNLADHMIGNVYAQFKEEDQAAAALNALQGRFYSGRPI 823
                     L KFGEIESL++CDNLADHMIGNVY QFKEEDQAAAAL ALQGRFYSGRPI
Sbjct: 80   DFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGRFYSGRPI 139

Query: 822  IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKTIGRELKRKLYGRHHGRF-WGTRSN 646
            IADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK + REL+RKL+GR+   +  G+RS 
Sbjct: 140  IADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLFGRYRRSYRRGSRSR 199

Query: 645  SRSVSP 628
            SRS+SP
Sbjct: 200  SRSISP 205


>ref|XP_002300614.1| predicted protein [Populus trichocarpa] gi|222842340|gb|EEE79887.1|
            predicted protein [Populus trichocarpa]
          Length = 273

 Score =  309 bits (791), Expect = 1e-81
 Identities = 151/185 (81%), Positives = 161/185 (87%)
 Frame = -3

Query: 1182 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPQKIQXXXX 1003
            FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP+DP KIQ    
Sbjct: 20   FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPLDPHKIQEHFE 79

Query: 1002 XXXXXXXXXLTKFGEIESLSVCDNLADHMIGNVYAQFKEEDQAAAALNALQGRFYSGRPI 823
                     L KFGEIESL+VCDNLADHMIGNVY  FKEEDQAAAAL ALQGRFYSGRPI
Sbjct: 80   EFYEDIFEELNKFGEIESLNVCDNLADHMIGNVYVLFKEEDQAAAALQALQGRFYSGRPI 139

Query: 822  IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKTIGRELKRKLYGRHHGRFWGTRSNS 643
            IADFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK IGR+L+RKL+GR+ G +  +RS S
Sbjct: 140  IADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRRKLFGRYRG-YRVSRSRS 198

Query: 642  RSVSP 628
            RSVSP
Sbjct: 199  RSVSP 203


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