BLASTX nr result

ID: Scutellaria24_contig00000075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000075
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163047.1| PREDICTED: photosystem I reaction center sub...   213   4e-53
ref|XP_004148659.1| PREDICTED: photosystem I reaction center sub...   212   1e-52
ref|XP_003602547.1| Photosystem I reaction center subunit N [Med...   211   2e-52
ref|XP_002306249.1| predicted protein [Populus trichocarpa] gi|1...   211   3e-52
ref|XP_002309915.1| predicted protein [Populus trichocarpa] gi|2...   205   2e-50

>ref|XP_004163047.1| PREDICTED: photosystem I reaction center subunit N,
           chloroplastic-like [Cucumis sativus]
          Length = 171

 Score =  213 bits (543), Expect = 4e-53
 Identities = 113/172 (65%), Positives = 126/172 (73%), Gaps = 12/172 (6%)
 Frame = -2

Query: 809 MAAMNLTVLACNYAVSGA---DLSSKVNSLPCVAIPL---QKLPVVVRAQQARIPECNES 648
           MA MN +VLACNYA+SGA   DL+SK+ + P VA P     KLP + RAQQA++PE    
Sbjct: 1   MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAI-RAQQAKVPEAKND 59

Query: 647 GRRXXXXXXXXXXXXXXXXXXG------VIDDYLEKSKANKELNDKKRLATSGANFARAF 486
           GRR                         VI+DYLEKSKANKELNDKKRLATSGANFARA+
Sbjct: 60  GRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAY 119

Query: 485 TVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKYKCGSNVFWKW 330
           TV+FGTCKFPENFTGCQDLAKQKKVPFI++DL LECEGKDKYKCGSNVFWKW
Sbjct: 120 TVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW 171


>ref|XP_004148659.1| PREDICTED: photosystem I reaction center subunit N,
           chloroplastic-like [Cucumis sativus]
          Length = 171

 Score =  212 bits (539), Expect = 1e-52
 Identities = 112/172 (65%), Positives = 125/172 (72%), Gaps = 12/172 (6%)
 Frame = -2

Query: 809 MAAMNLTVLACNYAVSGA---DLSSKVNSLPCVAIPL---QKLPVVVRAQQARIPECNES 648
           MA MN +VLACNYA+SGA   DL+SK+ + P VA P     KLP + RAQQ ++PE    
Sbjct: 1   MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAI-RAQQTKVPEAKND 59

Query: 647 GRRXXXXXXXXXXXXXXXXXXG------VIDDYLEKSKANKELNDKKRLATSGANFARAF 486
           GRR                         VI+DYLEKSKANKELNDKKRLATSGANFARA+
Sbjct: 60  GRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAY 119

Query: 485 TVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKYKCGSNVFWKW 330
           TV+FGTCKFPENFTGCQDLAKQKKVPFI++DL LECEGKDKYKCGSNVFWKW
Sbjct: 120 TVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW 171


>ref|XP_003602547.1| Photosystem I reaction center subunit N [Medicago truncatula]
           gi|355491595|gb|AES72798.1| Photosystem I reaction
           center subunit N [Medicago truncatula]
           gi|388492560|gb|AFK34346.1| unknown [Medicago
           truncatula]
          Length = 172

 Score =  211 bits (537), Expect = 2e-52
 Identities = 113/173 (65%), Positives = 129/173 (74%), Gaps = 13/173 (7%)
 Frame = -2

Query: 809 MAAMNLTVLACNYAVSGADLSSKVNSLPCVAIPLQ---KLPVVVRAQQARIPECNES--- 648
           MAAMN +VLAC+YA+SG++L++K+ S+P  A P     KLP++ +AQQ RIPE  ES   
Sbjct: 1   MAAMNSSVLACSYAISGSELNAKLISVPSAASPGVSGIKLPLI-KAQQVRIPEAKESRAS 59

Query: 647 -GRRXXXXXXXXXXXXXXXXXXG------VIDDYLEKSKANKELNDKKRLATSGANFARA 489
            GRR                         VI++YLEKSKANKELNDKKRLATSGANFARA
Sbjct: 60  DGRRNALALLAATLFTTAVSASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARA 119

Query: 488 FTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKYKCGSNVFWKW 330
           +TVQFGTCKFPENFTGCQDLAKQKKVPFI+EDL LECEGKDKYKCGSNVFWKW
Sbjct: 120 YTVQFGTCKFPENFTGCQDLAKQKKVPFITEDLELECEGKDKYKCGSNVFWKW 172


>ref|XP_002306249.1| predicted protein [Populus trichocarpa] gi|118486634|gb|ABK95154.1|
           unknown [Populus trichocarpa]
           gi|222855698|gb|EEE93245.1| predicted protein [Populus
           trichocarpa]
          Length = 172

 Score =  211 bits (536), Expect = 3e-52
 Identities = 115/173 (66%), Positives = 128/173 (73%), Gaps = 13/173 (7%)
 Frame = -2

Query: 809 MAAMNLTVLACNYAVSG---ADLSSKVNSLPCVAIPL---QKLPVVVRAQQARIPECN-- 654
           MAAMN +VLACNYA+SG   ++L++K+ S+P VA P+    KLP++ RAQQAR       
Sbjct: 1   MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASPVVSGPKLPII-RAQQARADSKEMK 59

Query: 653 -ESGRRXXXXXXXXXXXXXXXXXXG----VIDDYLEKSKANKELNDKKRLATSGANFARA 489
              GRR                       VI+DYLEKSKANKELNDKKRLATSGANFARA
Sbjct: 60  ASEGRRAALVYLAATLFTSAAAAASANAGVIEDYLEKSKANKELNDKKRLATSGANFARA 119

Query: 488 FTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKYKCGSNVFWKW 330
           +TVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKYKCGSNVFWKW
Sbjct: 120 YTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKYKCGSNVFWKW 172


>ref|XP_002309915.1| predicted protein [Populus trichocarpa] gi|222852818|gb|EEE90365.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  205 bits (521), Expect = 2e-50
 Identities = 113/173 (65%), Positives = 126/173 (72%), Gaps = 13/173 (7%)
 Frame = -2

Query: 809 MAAMNLTVLACNYAVSG---ADLSSKVNSLPCVA---IPLQKLPVVVRAQQARIPECN-- 654
           MAAMN +VLACNYA+SG   ++L++K+ S+P VA   +   KLPV+ RAQQ R       
Sbjct: 1   MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASLVVSGPKLPVI-RAQQTRADSREMK 59

Query: 653 -ESGRRXXXXXXXXXXXXXXXXXXG----VIDDYLEKSKANKELNDKKRLATSGANFARA 489
              GRR                       VI++YLEKSKANKELNDKKRLATSGANFARA
Sbjct: 60  ASEGRRAAMVYLAATLFTSAAAASSANAGVIEEYLEKSKANKELNDKKRLATSGANFARA 119

Query: 488 FTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKYKCGSNVFWKW 330
           FTVQFGTCKFPENFTGCQDLAKQKKVPFIS+DLALECEGKDKYKCGSNVFWKW
Sbjct: 120 FTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWKW 172


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