BLASTX nr result

ID: Scutellaria24_contig00000023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000023
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO59435.1| putative developmental protein [Nicotiana bentham...   145   4e-33
ref|XP_003543608.1| PREDICTED: charged multivesicular body prote...   144   6e-33
ref|XP_002281282.1| PREDICTED: charged multivesicular body prote...   142   2e-32
ref|XP_002515889.1| chmp1, putative [Ricinus communis] gi|223544...   139   2e-31
ref|XP_002303220.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31

>gb|AAO59435.1| putative developmental protein [Nicotiana benthamiana]
          Length = 203

 Score =  145 bits (365), Expect = 4e-33
 Identities = 78/103 (75%), Positives = 82/103 (79%)
 Frame = +1

Query: 46  MGNTEKLMQQIMDLKFTSKSLQRQARXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIR 225
           MGNTEKLM QIM+LKFTSKSLQRQAR                   GNMDGARIYAEN+IR
Sbjct: 1   MGNTEKLMNQIMELKFTSKSLQRQARKCEKDEKSEKLKVKKAIEKGNMDGARIYAENAIR 60

Query: 226 KRNEQMNYLRLASRLDAVVARLDTQAKMTAISKSMGNIVKSLE 354
           KR+EQMNYLRL+SRLDAVVARLDTQAKMT ISKSMGNIVKSLE
Sbjct: 61  KRSEQMNYLRLSSRLDAVVARLDTQAKMTTISKSMGNIVKSLE 103


>ref|XP_003543608.1| PREDICTED: charged multivesicular body protein 1-like isoform 1
           [Glycine max] gi|356550468|ref|XP_003543609.1|
           PREDICTED: charged multivesicular body protein 1-like
           isoform 2 [Glycine max] gi|356550470|ref|XP_003543610.1|
           PREDICTED: charged multivesicular body protein 1-like
           isoform 3 [Glycine max] gi|356556672|ref|XP_003546647.1|
           PREDICTED: charged multivesicular body protein 1-like
           [Glycine max]
          Length = 203

 Score =  144 bits (364), Expect = 6e-33
 Identities = 78/103 (75%), Positives = 81/103 (78%)
 Frame = +1

Query: 46  MGNTEKLMQQIMDLKFTSKSLQRQARXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIR 225
           MGNTEKLM QIM+LKFTSKSLQRQ+R                   GNMDGARIYAEN+IR
Sbjct: 1   MGNTEKLMNQIMELKFTSKSLQRQSRKCEKEEKSEKLKVKKAIEKGNMDGARIYAENAIR 60

Query: 226 KRNEQMNYLRLASRLDAVVARLDTQAKMTAISKSMGNIVKSLE 354
           KR EQMNYLRLASRLDAVVARLDTQAKMT ISKSMGNIVKSLE
Sbjct: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMTTISKSMGNIVKSLE 103


>ref|XP_002281282.1| PREDICTED: charged multivesicular body protein 1 [Vitis vinifera]
           gi|147855645|emb|CAN79153.1| hypothetical protein
           VITISV_016190 [Vitis vinifera]
          Length = 202

 Score =  142 bits (359), Expect = 2e-32
 Identities = 77/103 (74%), Positives = 81/103 (78%)
 Frame = +1

Query: 46  MGNTEKLMQQIMDLKFTSKSLQRQARXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIR 225
           MGNTEKLM QIM+LKFTSKSLQRQAR                   GNMDGARIYAEN+IR
Sbjct: 1   MGNTEKLMNQIMELKFTSKSLQRQARKCEKEEKGEKLKVKKAIEKGNMDGARIYAENAIR 60

Query: 226 KRNEQMNYLRLASRLDAVVARLDTQAKMTAISKSMGNIVKSLE 354
           KR EQMNYLRL+SRLDAVVARLDTQAKMT ISKSMG+IVKSLE
Sbjct: 61  KRTEQMNYLRLSSRLDAVVARLDTQAKMTTISKSMGSIVKSLE 103


>ref|XP_002515889.1| chmp1, putative [Ricinus communis] gi|223544794|gb|EEF46309.1|
           chmp1, putative [Ricinus communis]
          Length = 203

 Score =  139 bits (351), Expect = 2e-31
 Identities = 75/103 (72%), Positives = 80/103 (77%)
 Frame = +1

Query: 46  MGNTEKLMQQIMDLKFTSKSLQRQARXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIR 225
           MGNTEKL+ QIMDLKFT+KSLQRQAR                   GNMDGARIYAEN+IR
Sbjct: 1   MGNTEKLLNQIMDLKFTAKSLQRQARKCEKEEKSEKLKVKKAIEKGNMDGARIYAENAIR 60

Query: 226 KRNEQMNYLRLASRLDAVVARLDTQAKMTAISKSMGNIVKSLE 354
           KR EQMNYLRLASRLDAVVARLDTQAKMT I+KSM +IVKSLE
Sbjct: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMASIVKSLE 103


>ref|XP_002303220.1| predicted protein [Populus trichocarpa] gi|222840652|gb|EEE78199.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score =  139 bits (351), Expect = 2e-31
 Identities = 74/103 (71%), Positives = 81/103 (78%)
 Frame = +1

Query: 46  MGNTEKLMQQIMDLKFTSKSLQRQARXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIR 225
           MGNT+KL+ QIMDLKFTSKSLQRQ+R                   GNMDGARIYAEN+IR
Sbjct: 1   MGNTDKLLNQIMDLKFTSKSLQRQSRKCEKEEKSEKLKVKKAIEKGNMDGARIYAENAIR 60

Query: 226 KRNEQMNYLRLASRLDAVVARLDTQAKMTAISKSMGNIVKSLE 354
           KR EQMNYLRL+SRLDAVVARLDTQAKMT I+KSMG+IVKSLE
Sbjct: 61  KRTEQMNYLRLSSRLDAVVARLDTQAKMTTINKSMGSIVKSLE 103


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