BLASTX nr result

ID: Scutellaria23_contig00035917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00035917
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275084.1| PREDICTED: RING-H2 finger protein ATL72 [Vit...    60   1e-07
ref|XP_002266740.1| PREDICTED: RING-H2 finger protein ATL72 [Vit...    60   2e-07
emb|CAN65088.1| hypothetical protein VITISV_035033 [Vitis vinifera]    60   2e-07
ref|XP_002520866.1| RING-H2 finger protein ATL3C, putative [Rici...    58   7e-07
ref|XP_003533659.1| PREDICTED: RING-H2 finger protein ATL73-like...    57   1e-06

>ref|XP_002275084.1| PREDICTED: RING-H2 finger protein ATL72 [Vitis vinifera]
           gi|147769463|emb|CAN70348.1| hypothetical protein
           VITISV_012580 [Vitis vinifera]
           gi|297736494|emb|CBI25365.3| unnamed protein product
           [Vitis vinifera]
          Length = 197

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/78 (43%), Positives = 43/78 (55%)
 Frame = +2

Query: 2   HRLLLNSDITLTPTFVNNTTGSHYEDANFDSNMVIIXXXXXXXXXXXXXXNSIVRCMLRC 181
           HRLLL++D   +P   +    S+  +ANFD+NMVII              NSIVRC LRC
Sbjct: 9   HRLLLDTDPGASPNVGSRMRSSYTNEANFDTNMVIILAALLCALICALGLNSIVRCALRC 68

Query: 182 NPTYHPETADSVALRLAS 235
           +     ETAD  A RLA+
Sbjct: 69  SRRLAFETADETAARLAA 86


>ref|XP_002266740.1| PREDICTED: RING-H2 finger protein ATL72 [Vitis vinifera]
          Length = 177

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/77 (42%), Positives = 43/77 (55%)
 Frame = +2

Query: 5   RLLLNSDITLTPTFVNNTTGSHYEDANFDSNMVIIXXXXXXXXXXXXXXNSIVRCMLRCN 184
           RLLL+++  + P   +  + S+  DANFDSNMVII              NSIVRC LRC+
Sbjct: 11  RLLLDTETAMPPMNGSRGSSSYANDANFDSNMVIILAALLCALICALGLNSIVRCALRCS 70

Query: 185 PTYHPETADSVALRLAS 235
             +  ET D VA  LA+
Sbjct: 71  NRFSLETPDQVAAHLAT 87


>emb|CAN65088.1| hypothetical protein VITISV_035033 [Vitis vinifera]
          Length = 219

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/77 (42%), Positives = 43/77 (55%)
 Frame = +2

Query: 5   RLLLNSDITLTPTFVNNTTGSHYEDANFDSNMVIIXXXXXXXXXXXXXXNSIVRCMLRCN 184
           RLLL+++  + P   +  + S+  DANFDSNMVII              NSIVRC LRC+
Sbjct: 53  RLLLDTETAMPPMNGSRGSSSYANDANFDSNMVIILAALLCALICALGLNSIVRCALRCS 112

Query: 185 PTYHPETADSVALRLAS 235
             +  ET D VA  LA+
Sbjct: 113 NRFSLETPDQVAAHLAT 129


>ref|XP_002520866.1| RING-H2 finger protein ATL3C, putative [Ricinus communis]
           gi|223539997|gb|EEF41575.1| RING-H2 finger protein
           ATL3C, putative [Ricinus communis]
          Length = 208

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/78 (43%), Positives = 43/78 (55%)
 Frame = +2

Query: 2   HRLLLNSDITLTPTFVNNTTGSHYEDANFDSNMVIIXXXXXXXXXXXXXXNSIVRCMLRC 181
           HRLLLN++   TP    +   S+  +ANFD+NMVII              NSIVRC LRC
Sbjct: 12  HRLLLNTESN-TPPINGSRIRSYTNEANFDTNMVIILAALLCALICALGLNSIVRCALRC 70

Query: 182 NPTYHPETADSVALRLAS 235
           +  +  ET D  A RLA+
Sbjct: 71  SRRFAFETPDEAAARLAA 88


>ref|XP_003533659.1| PREDICTED: RING-H2 finger protein ATL73-like [Glycine max]
          Length = 185

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
 Frame = +2

Query: 5   RLLLNSDITLTPTFV----NNTTGSHYEDANFDSNMVIIXXXXXXXXXXXXXXNSIVRCM 172
           R LL +++++ P++     NNT  +   DANFD+NMVII              NSI RC 
Sbjct: 4   RRLLETELSMPPSYGGSGGNNTRDTFISDANFDTNMVIILAALLCALICALGLNSIARCA 63

Query: 173 LRCNPTYHPETADSVALRLA 232
           LRC   +  ETA+  A RLA
Sbjct: 64  LRCGRRFGDETAEQAAARLA 83


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