BLASTX nr result

ID: Scutellaria23_contig00035875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00035875
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524030.1| pentatricopeptide repeat-containing protein,...    72   4e-11
ref|XP_003637381.1| Pentatricopeptide repeat-containing protein ...    72   5e-11
ref|XP_003637626.1| Pentatricopeptide repeat-containing protein ...    69   3e-10
ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containi...    68   7e-10
tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea m...    61   1e-07

>ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536757|gb|EEF38398.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1016

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/77 (46%), Positives = 48/77 (62%)
 Frame = +2

Query: 2   SDMVKRGVDCDNFTCNILIKGYCEKGMLENARLVMDMMSSNVHGDGKVCRDVVGFNTLIS 181
           S MVK+    D  TCNIL+KG+C  G+ +    +MD + S     G  C+DV+GFNTLI 
Sbjct: 101 SIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVS-----GGTCKDVIGFNTLID 155

Query: 182 GYCKAGKVVGGLQLMGR 232
           GYCKAG++   L L+ R
Sbjct: 156 GYCKAGEMSLALDLVER 172


>ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503316|gb|AES84519.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/75 (48%), Positives = 50/75 (66%)
 Frame = +2

Query: 2   SDMVKRGVDCDNFTCNILIKGYCEKGMLENARLVMDMMSSNVHGDGKVCRDVVGFNTLIS 181
           S+MVKRG+  D+ TCNIL+KGYC  G+++ A  VM  +      DG V +DV+G NTLI 
Sbjct: 186 SEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLV-----DGGVTKDVIGLNTLID 240

Query: 182 GYCKAGKVVGGLQLM 226
           GYC+AG +    +L+
Sbjct: 241 GYCEAGLMSQATELI 255


>ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503561|gb|AES84764.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 989

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/65 (52%), Positives = 45/65 (69%)
 Frame = +2

Query: 2   SDMVKRGVDCDNFTCNILIKGYCEKGMLENARLVMDMMSSNVHGDGKVCRDVVGFNTLIS 181
           S+MVKRG+  D+ TCNIL+KGYC  G+++ A  VM  +      DG V +DV+G NTLI 
Sbjct: 186 SEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLV-----DGGVTKDVIGLNTLID 240

Query: 182 GYCKA 196
           GYC+A
Sbjct: 241 GYCEA 245


>ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/75 (46%), Positives = 49/75 (65%)
 Frame = +2

Query: 2   SDMVKRGVDCDNFTCNILIKGYCEKGMLENARLVMDMMSSNVHGDGKVCRDVVGFNTLIS 181
           S+MVK+GV  D+ TCNIL+KGYC+ G+++ A  +M     N+ G G V  D +G NTL+ 
Sbjct: 99  SEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIM----GNLVGGG-VPLDAIGLNTLVD 153

Query: 182 GYCKAGKVVGGLQLM 226
           GYC+ G V   L L+
Sbjct: 154 GYCEVGLVSRALDLV 168


>tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/75 (42%), Positives = 44/75 (58%)
 Frame = +2

Query: 8   MVKRGVDCDNFTCNILIKGYCEKGMLENARLVMDMMSSNVHGDGKVCRDVVGFNTLISGY 187
           ++KRG+  + FTCNI I+G CE G LE A  +++ M +       V  DVV +NTL+ G 
Sbjct: 237 VLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGA------YVAPDVVTYNTLMRGL 290

Query: 188 CKAGKVVGGLQLMGR 232
           CK  KV    Q +GR
Sbjct: 291 CKDSKVQEAAQYLGR 305


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