BLASTX nr result

ID: Scutellaria23_contig00035869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00035869
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH66707.1| OSIGBa0147J19.11 [Oryza sativa Indica Group]          162   3e-38
gb|ABA94769.1| retrotransposon protein, putative, Ty3-gypsy subc...   162   3e-38
gb|ABA97418.2| retrotransposon protein, putative, Ty3-gypsy subc...   162   3e-38
gb|ABA98196.1| retrotransposon protein, putative, Ty3-gypsy subc...   161   4e-38
emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group] gi...   161   4e-38

>emb|CAH66707.1| OSIGBa0147J19.11 [Oryza sativa Indica Group]
          Length = 1851

 Score =  162 bits (410), Expect = 3e-38
 Identities = 72/102 (70%), Positives = 87/102 (85%)
 Frame = +1

Query: 1    AKFKKCEFWLDNVSFLGHIVSAQEIEVDPAKVEAVSNWKAPSNVNEVRSFLGLAGYYRRF 180
            AKF KCEFW+D V+FLGH++S+  +EVDP+KVEAV  W AP NV+E+RSFLGLAGYYRRF
Sbjct: 1109 AKFSKCEFWIDRVAFLGHVISSNGVEVDPSKVEAVLAWNAPKNVSEIRSFLGLAGYYRRF 1168

Query: 181  IKGFSKIALPMTRLTSKETKFQWTDRCEESFQELKRRLTTAP 306
            I+GFSK+A PMT L  KE KFQW+  CE+SFQE+K+RLTTAP
Sbjct: 1169 IEGFSKLARPMTELLKKEKKFQWSAACEDSFQEMKKRLTTAP 1210


>gb|ABA94769.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1747

 Score =  162 bits (409), Expect = 3e-38
 Identities = 73/102 (71%), Positives = 86/102 (84%)
 Frame = +1

Query: 1    AKFKKCEFWLDNVSFLGHIVSAQEIEVDPAKVEAVSNWKAPSNVNEVRSFLGLAGYYRRF 180
            AKF KCEFWLD V+FLGH++S+  +EVDP+KVEAV  W  P NV+E+RSFLGLAGYYRRF
Sbjct: 1026 AKFSKCEFWLDRVAFLGHVISSNGVEVDPSKVEAVLAWNPPKNVSEIRSFLGLAGYYRRF 1085

Query: 181  IKGFSKIALPMTRLTSKETKFQWTDRCEESFQELKRRLTTAP 306
            I+GFSK+A PMT L  KE KFQW+  CE+SFQELK+RLTTAP
Sbjct: 1086 IEGFSKLARPMTELLKKEKKFQWSAACEDSFQELKKRLTTAP 1127


>gb|ABA97418.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1807

 Score =  162 bits (409), Expect = 3e-38
 Identities = 73/102 (71%), Positives = 86/102 (84%)
 Frame = +1

Query: 1    AKFKKCEFWLDNVSFLGHIVSAQEIEVDPAKVEAVSNWKAPSNVNEVRSFLGLAGYYRRF 180
            AKF KCEFWLD V+FLGH++S+  +EVDP+KVEAV  W  P NV+E+RSFLGLAGYYRRF
Sbjct: 1065 AKFSKCEFWLDRVAFLGHVISSNGVEVDPSKVEAVLAWNPPKNVSEIRSFLGLAGYYRRF 1124

Query: 181  IKGFSKIALPMTRLTSKETKFQWTDRCEESFQELKRRLTTAP 306
            I+GFSK+A PMT L  KE KFQW+  CE+SFQELK+RLTTAP
Sbjct: 1125 IEGFSKLARPMTELLKKEKKFQWSAACEDSFQELKKRLTTAP 1166


>gb|ABA98196.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1510

 Score =  161 bits (408), Expect = 4e-38
 Identities = 72/102 (70%), Positives = 86/102 (84%)
 Frame = +1

Query: 1    AKFKKCEFWLDNVSFLGHIVSAQEIEVDPAKVEAVSNWKAPSNVNEVRSFLGLAGYYRRF 180
            AKF KCEFWLD V+FLGH++S+  +EVDP+KVEAV  W  P NV+E+RSFLGLAGYYRRF
Sbjct: 899  AKFSKCEFWLDRVAFLGHVISSSGVEVDPSKVEAVLAWNPPKNVSEIRSFLGLAGYYRRF 958

Query: 181  IKGFSKIALPMTRLTSKETKFQWTDRCEESFQELKRRLTTAP 306
            I+GFSK+A PMT L  KE KFQW+  CE+SFQE+K+RLTTAP
Sbjct: 959  IEGFSKLARPMTELLKKEKKFQWSTACEDSFQEIKKRLTTAP 1000


>emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group]
            gi|57834090|emb|CAE04759.2| OSJNBb0060E08.22 [Oryza
            sativa Japonica Group]
          Length = 1851

 Score =  161 bits (408), Expect = 4e-38
 Identities = 72/102 (70%), Positives = 86/102 (84%)
 Frame = +1

Query: 1    AKFKKCEFWLDNVSFLGHIVSAQEIEVDPAKVEAVSNWKAPSNVNEVRSFLGLAGYYRRF 180
            AKF KCEFWLD V+FLGH++S+  +EVDP+KVEAV  W  P NV+E+RSFLGLAGYYRRF
Sbjct: 1109 AKFSKCEFWLDRVAFLGHVISSNGVEVDPSKVEAVLAWNPPKNVSEIRSFLGLAGYYRRF 1168

Query: 181  IKGFSKIALPMTRLTSKETKFQWTDRCEESFQELKRRLTTAP 306
            I+GFSK+A PMT L  KE KFQW+  CE+SFQE+K+RLTTAP
Sbjct: 1169 IEGFSKLARPMTELLKKEKKFQWSTACEDSFQEMKKRLTTAP 1210


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