BLASTX nr result

ID: Scutellaria23_contig00035867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00035867
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containi...   131   7e-29
ref|XP_002514539.1| pentatricopeptide repeat-containing protein,...   130   9e-29
sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-c...   125   5e-27
gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]            125   5e-27
ref|NP_850342.1| pentatricopeptide repeat-containing protein [Ar...   125   5e-27

>ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  131 bits (329), Expect = 7e-29
 Identities = 64/95 (67%), Positives = 77/95 (81%)
 Frame = +3

Query: 3   GATSVAAVISSLVSMYSRCGCLDDAEKVFEERQGAESDHVLWSSMIAAYGFHGKGGESIE 182
           GA+S  +V+SSLVSMYSRCGCL D+ K F E +  E D VLWSSMIAAYGFHG+G E+I+
Sbjct: 332 GASSEVSVVSSLVSMYSRCGCLQDSIKTFLECK--ERDVVLWSSMIAAYGFHGQGEEAIK 389

Query: 183 LFNRMELDGVKANKVTFLSLLYACSHCGLRDAGLG 287
           LFN ME + +  N++TFLSLLYACSHCGL+D GLG
Sbjct: 390 LFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLG 424


>ref|XP_002514539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546143|gb|EEF47645.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 332

 Score =  130 bits (328), Expect = 9e-29
 Identities = 63/94 (67%), Positives = 80/94 (85%)
 Frame = +3

Query: 3   GATSVAAVISSLVSMYSRCGCLDDAEKVFEERQGAESDHVLWSSMIAAYGFHGKGGESIE 182
           GA+SV AV SSL+SMYSRCGCL+D+ KVF E +  + D +LWSSMIAAYGFHG+G E+I+
Sbjct: 220 GASSVVAVTSSLISMYSRCGCLEDSVKVFLECK--DVDVILWSSMIAAYGFHGRGEEAIK 277

Query: 183 LFNRMELDGVKANKVTFLSLLYACSHCGLRDAGL 284
           LF++ME + ++AN VTFLSLLYACSHCGL+D G+
Sbjct: 278 LFHQMEQENLEANDVTFLSLLYACSHCGLKDKGV 311


>sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
          Length = 650

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/95 (64%), Positives = 76/95 (80%), Gaps = 1/95 (1%)
 Frame = +3

Query: 3   GATSVAAVISSLVSMYSRCGCLDDAEKVFEERQGAESDHVLWSSMIAAYGFHGKGGESIE 182
           GA+SV AV+SSL+SMYS+CGCL DA K F ER+  + D V+WSSMI+AYGFHG+G E+IE
Sbjct: 307 GASSVVAVVSSLISMYSKCGCLGDAAKAFSERE--DEDEVMWSSMISAYGFHGQGDEAIE 364

Query: 183 LFNRM-ELDGVKANKVTFLSLLYACSHCGLRDAGL 284
           LFN M E   ++ N+V FL+LLYACSH GL+D GL
Sbjct: 365 LFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGL 399


>gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
          Length = 563

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/95 (64%), Positives = 76/95 (80%), Gaps = 1/95 (1%)
 Frame = +3

Query: 3   GATSVAAVISSLVSMYSRCGCLDDAEKVFEERQGAESDHVLWSSMIAAYGFHGKGGESIE 182
           GA+SV AV+SSL+SMYS+CGCL DA K F ER+  + D V+WSSMI+AYGFHG+G E+IE
Sbjct: 220 GASSVVAVVSSLISMYSKCGCLGDAAKAFSERE--DEDEVMWSSMISAYGFHGQGDEAIE 277

Query: 183 LFNRM-ELDGVKANKVTFLSLLYACSHCGLRDAGL 284
           LFN M E   ++ N+V FL+LLYACSH GL+D GL
Sbjct: 278 LFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGL 312


>ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15
           [Arabidopsis thaliana] gi|330254831|gb|AEC09925.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 565

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/95 (64%), Positives = 76/95 (80%), Gaps = 1/95 (1%)
 Frame = +3

Query: 3   GATSVAAVISSLVSMYSRCGCLDDAEKVFEERQGAESDHVLWSSMIAAYGFHGKGGESIE 182
           GA+SV AV+SSL+SMYS+CGCL DA K F ER+  + D V+WSSMI+AYGFHG+G E+IE
Sbjct: 222 GASSVVAVVSSLISMYSKCGCLGDAAKAFSERE--DEDEVMWSSMISAYGFHGQGDEAIE 279

Query: 183 LFNRM-ELDGVKANKVTFLSLLYACSHCGLRDAGL 284
           LFN M E   ++ N+V FL+LLYACSH GL+D GL
Sbjct: 280 LFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGL 314


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