BLASTX nr result

ID: Scutellaria23_contig00035814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00035814
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317746.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_002513589.1| DNA binding protein, putative [Ricinus commu...    74   1e-11
ref|XP_002331842.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_003602194.1| Transcription factor SPEECHLESS [Medicago tr...    72   6e-11
ref|NP_200133.2| transcription factor SPEECHLESS [Arabidopsis th...    70   2e-10

>ref|XP_002317746.1| predicted protein [Populus trichocarpa] gi|222858419|gb|EEE95966.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 46/89 (51%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
 Frame = +3

Query: 3   RTPQP---YKPRQLLHNIQXXXXXXXXXXXXXXXXXXXXXINDTVNELVATSRSAIAEVE 173
           RTPQP   YKPR L                          IND +NELVA S+SAIA+VE
Sbjct: 190 RTPQPCSPYKPRILQQGY--LSPTMANSLESSPSPSSSSSINDNINELVANSKSAIADVE 247

Query: 174 VKFCGPNLLLKTVSHLIPGQLLKIVAALE 260
           VKF GPN+LLKTVS  IPGQ +KI++ALE
Sbjct: 248 VKFSGPNVLLKTVSPQIPGQAVKIISALE 276


>ref|XP_002513589.1| DNA binding protein, putative [Ricinus communis]
           gi|223547497|gb|EEF48992.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 336

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 45/87 (51%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   RTPQPYKP-RQLLHNIQXXXXXXXXXXXXXXXXXXXXXINDTVNELVATSRSAIAEVEVK 179
           RTPQP  P R  L                         IND +NELVA S+SAIA+VEVK
Sbjct: 204 RTPQPGSPYRPRLQQQGYLSPTVASSLEPSPTTSSSSSINDNINELVANSKSAIADVEVK 263

Query: 180 FCGPNLLLKTVSHLIPGQLLKIVAALE 260
           F GPNLLLKTVS  IPGQ  KI++ALE
Sbjct: 264 FSGPNLLLKTVSPRIPGQATKIISALE 290


>ref|XP_002331842.1| predicted protein [Populus trichocarpa] gi|222875080|gb|EEF12211.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/49 (73%), Positives = 43/49 (87%)
 Frame = +3

Query: 114 INDTVNELVATSRSAIAEVEVKFCGPNLLLKTVSHLIPGQLLKIVAALE 260
           IND +NEL+A S+SAIA+VEVKF GPN+LLKTVS  IPGQ +KIV+ALE
Sbjct: 208 INDNINELIANSKSAIADVEVKFSGPNVLLKTVSPRIPGQAVKIVSALE 256


>ref|XP_003602194.1| Transcription factor SPEECHLESS [Medicago truncatula]
           gi|355491242|gb|AES72445.1| Transcription factor
           SPEECHLESS [Medicago truncatula]
          Length = 329

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 44/89 (49%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
 Frame = +3

Query: 3   RTPQP---YKPRQLLHNIQXXXXXXXXXXXXXXXXXXXXXINDTVNELVATSRSAIAEVE 173
           RTPQP   YKPR     I                      +ND +NELVA S+S IA+VE
Sbjct: 200 RTPQPTSPYKPRMQQSYIALSPLDPSPTSSSTSS------VNDNINELVANSKSPIADVE 253

Query: 174 VKFCGPNLLLKTVSHLIPGQLLKIVAALE 260
           VKF GP++LLKTVS  IPGQ LKI++ALE
Sbjct: 254 VKFSGPHVLLKTVSQRIPGQPLKIISALE 282


>ref|NP_200133.2| transcription factor SPEECHLESS [Arabidopsis thaliana]
           gi|75294400|sp|Q700C7.1|SPCH_ARATH RecName:
           Full=Transcription factor SPEECHLESS; AltName:
           Full=Basic helix-loop-helix protein 98; Short=AtbHLH98;
           Short=bHLH 98; AltName: Full=Transcription factor EN 19;
           AltName: Full=bHLH transcription factor bHLH098
           gi|45935051|gb|AAS79560.1| basic helix-loop-helix family
           protein [Arabidopsis thaliana]
           gi|46367490|emb|CAG25871.1| hypothetical protein
           [Arabidopsis thaliana] gi|112889216|gb|ABI26170.1|
           SPEECHLESS [Arabidopsis thaliana]
           gi|332008940|gb|AED96323.1| transcription factor
           SPEECHLESS [Arabidopsis thaliana]
          Length = 364

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/48 (68%), Positives = 42/48 (87%)
 Frame = +3

Query: 117 NDTVNELVATSRSAIAEVEVKFCGPNLLLKTVSHLIPGQLLKIVAALE 260
           +  +NELVA S+SA+A+VEVKF G N+LLKTVSH IPGQ++KI+AALE
Sbjct: 271 SSVINELVANSKSALADVEVKFSGANVLLKTVSHKIPGQVMKIIAALE 318