BLASTX nr result

ID: Scutellaria23_contig00035735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00035735
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326677.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
emb|CAN83063.1| hypothetical protein VITISV_010308 [Vitis vinifera]    96   4e-18
emb|CBI40923.3| unnamed protein product [Vitis vinifera]               95   5e-18
ref|XP_002524359.1| RNA binding protein, putative [Ricinus commu...    88   6e-16
ref|NP_193496.1| tRNA/rRNA methyltransferase (SpoU) family prote...    72   5e-11

>ref|XP_002326677.1| predicted protein [Populus trichocarpa] gi|222833999|gb|EEE72476.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 60/149 (40%), Positives = 84/149 (56%), Gaps = 2/149 (1%)
 Frame = +2

Query: 11  LVHSHVRELFNEVASLFLNVVSETNSWEVLEATMVPLLLRSIGLSMGMVQSEEFAIYKWS 190
           +VH+  RE+ NE+A  F  VVS T+SW VLEA +VP  LRS+GLS+GM+Q+EE   ++W 
Sbjct: 1   MVHAFEREMLNEIAESFFCVVSSTHSWGVLEANLVPFFLRSVGLSIGMIQNEESDAFEWD 60

Query: 191 ESCIVKGLMDNEVSLKLFKDLHDKLTEKYTSEDLLVCNSYDFPLSMSCNMLTLTLVAALR 370
              I  GL D E    L              ++ ++  S  FPL +SC++LTL L AAL+
Sbjct: 61  HFSIYHGLSDLENDFDL-------------DQEPMLSLSGSFPLPISCHILTLILDAALQ 107

Query: 371 NNYGGVGSGPTLANG--SVAKTFAGNMHW 451
           +      +   LANG   V K F+ N+ W
Sbjct: 108 SFQAVSSTKSMLANGFCDVEKLFS-NLLW 135


>emb|CAN83063.1| hypothetical protein VITISV_010308 [Vitis vinifera]
          Length = 988

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 56/151 (37%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
 Frame = +2

Query: 2   LLELVHSHVRELFNEVASLFLNVVSETNSWEVLEATMVPLLLRSIGLSMGMVQSEEFAIY 181
           L+++VH+  RE+ N+    F++VV +TNSW VLE T+VP L+RS+GLSMGM+Q+EE AIY
Sbjct: 100 LMKIVHACDREMLNQTTESFVDVVIKTNSWGVLEETLVPFLIRSVGLSMGMLQNEESAIY 159

Query: 182 KWSESCIVKGLMDNEVSLKLFKDLHDKLTEKYTSEDLLVCNSYDFPLSMSCNMLTLTLVA 361
           +W+ S +      ++VS+           ++    D++  + +   L +SC++LT  L A
Sbjct: 160 QWTGSSV------SQVSI-----------QQQNYSDMIEESMFPLSLPISCHILTSILDA 202

Query: 362 ALRNNYGGVGSGPTLANG-SVAKTFAGNMHW 451
           AL+++     +   LAN    A+ FAG++ W
Sbjct: 203 ALQSHPEAPTTNLILANECCYAENFAGHLLW 233


>emb|CBI40923.3| unnamed protein product [Vitis vinifera]
          Length = 6988

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 56/151 (37%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
 Frame = +2

Query: 2   LLELVHSHVRELFNEVASLFLNVVSETNSWEVLEATMVPLLLRSIGLSMGMVQSEEFAIY 181
           L+++VH+  RE+ N+    F++VV +TNSW VLE T+VP L+RS+GLSMGM+Q+EE AIY
Sbjct: 100 LMKIVHACDREMLNQTTESFVDVVIKTNSWGVLEETLVPFLIRSVGLSMGMLQNEESAIY 159

Query: 182 KWSESCIVKGLMDNEVSLKLFKDLHDKLTEKYTSEDLLVCNSYDFPLSMSCNMLTLTLVA 361
           +W+ S +      ++VS+           ++    D++  + +   L +SC++LT  L A
Sbjct: 160 QWTGSSV------SQVSI-----------QQRNYSDMIEESMFPLSLPISCHILTSILDA 202

Query: 362 ALRNNYGGVGSGPTLANG-SVAKTFAGNMHW 451
           AL+++     +   LAN    A+ FAG++ W
Sbjct: 203 ALQSHPEAPTTNLILANECCYAENFAGHLLW 233


>ref|XP_002524359.1| RNA binding protein, putative [Ricinus communis]
           gi|223536320|gb|EEF37970.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 1744

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/140 (34%), Positives = 83/140 (59%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   LLELVHSHVRELFNEVASLFLNVVSETNSWEVLEATMVPLLLRSIGLSMGMVQSEEFAIY 181
           L+++ H+  RE+ N++A  F +VV+ TNSW+VLEAT+VP  LRS GL+M M+Q+EE  I+
Sbjct: 95  LMKMAHALEREMLNQIAESFFDVVNVTNSWDVLEATLVPFFLRSAGLAMDMLQNEESDIF 154

Query: 182 KWSE-SCIVKGLMDNEVSLKLFKDLHDKLTEKYTSEDLLVCNSYDFPLSMSCNMLTLTLV 358
           +W++ S ++ GL+D                +    ++ ++  S  FPL +SC++L + L 
Sbjct: 155 EWAQHSVLLSGLID----------------DSNLDKEFMLSLSGSFPLPISCHVLAIILD 198

Query: 359 AALRNNYGGVGSGPTLANGS 418
           + L++      +   + NGS
Sbjct: 199 STLQSCNAASRTESMVENGS 218


>ref|NP_193496.1| tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis
           thaliana] gi|332658520|gb|AEE83920.1| tRNA/rRNA
           methyltransferase (SpoU) family protein [Arabidopsis
           thaliana]
          Length = 1850

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/125 (32%), Positives = 66/125 (52%)
 Frame = +2

Query: 2   LLELVHSHVRELFNEVASLFLNVVSETNSWEVLEATMVPLLLRSIGLSMGMVQSEEFAIY 181
           L+++V ++  ++ N++   F +VV ETN  ++L  ++VP LLRS+G SMGM Q EE    
Sbjct: 105 LMKMVRAYDLDMLNKIVESFFDVVIETNVLDMLGVSLVPFLLRSVGFSMGMRQHEESDFI 164

Query: 182 KWSESCIVKGLMDNEVSLKLFKDLHDKLTEKYTSEDLLVCNSYDFPLSMSCNMLTLTLVA 361
           KW + C                 L D L      E+ +   S  FP+ +SC++L L L A
Sbjct: 165 KWGDLC-----------------LRDSLNTIDMDENYIAQLSGSFPIPLSCHLLNLILNA 207

Query: 362 ALRNN 376
           A +++
Sbjct: 208 AFQSH 212


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