BLASTX nr result

ID: Scutellaria23_contig00035632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00035632
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s...    87   1e-15
emb|CBI22720.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002321920.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III s...    80   2e-13
ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III s...    80   2e-13

>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
           vinifera]
          Length = 511

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 45/103 (43%), Positives = 68/103 (66%), Gaps = 12/103 (11%)
 Frame = -2

Query: 274 YKLWKDEYIHMEKVL---TKELQIFLWRVNEQSLREQFVDASYDAALNLRLRIAHQKDRE 104
           Y+LWKDEY+ MEK+    +++ Q  LW+V + +L    ++  Y +ALNL LR+A++ ++E
Sbjct: 406 YQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSALNLSLRVAYELEQE 465

Query: 103 KEVVQTAEER---------ERLEKVREIFESSLMKLDDVILLF 2
           +E++Q   E+         ERL KVR + ESSLMKLDD I+LF
Sbjct: 466 QEIIQLPREKRVGALGNRFERLRKVRILLESSLMKLDDAIMLF 508


>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 45/103 (43%), Positives = 68/103 (66%), Gaps = 12/103 (11%)
 Frame = -2

Query: 274 YKLWKDEYIHMEKVL---TKELQIFLWRVNEQSLREQFVDASYDAALNLRLRIAHQKDRE 104
           Y+LWKDEY+ MEK+    +++ Q  LW+V + +L    ++  Y +ALNL LR+A++ ++E
Sbjct: 419 YQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSALNLSLRVAYELEQE 478

Query: 103 KEVVQTAEER---------ERLEKVREIFESSLMKLDDVILLF 2
           +E++Q   E+         ERL KVR + ESSLMKLDD I+LF
Sbjct: 479 QEIIQLPREKRVGALGNRFERLRKVRILLESSLMKLDDAIMLF 521


>ref|XP_002321920.1| predicted protein [Populus trichocarpa] gi|222868916|gb|EEF06047.1|
           predicted protein [Populus trichocarpa]
          Length = 519

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/96 (42%), Positives = 66/96 (68%), Gaps = 6/96 (6%)
 Frame = -2

Query: 271 KLWKDEYIHMEKVLTKELQIFLWRVNEQSLREQFVDASYDAALNLRLRIAHQKDREKEVV 92
           K+W+ +Y+ MEK++    Q  LW+VN  +LRE+ +D  + AALNL LR+A++ +++KE++
Sbjct: 421 KMWQGDYLQMEKLIAGPTQFLLWKVNMINLRERVLDDMFHAALNLSLRVAYELEQQKEIL 480

Query: 91  QTA------EERERLEKVREIFESSLMKLDDVILLF 2
                    E+ E+L+KVR + ESS MKLDD I++F
Sbjct: 481 HLGVDGPMKEKYEKLKKVRFLLESSRMKLDDAIMIF 516


>ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
           [Cucumis sativus]
          Length = 518

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 12/103 (11%)
 Frame = -2

Query: 274 YKLWKDEYIHMEKV---LTKELQIFLWRVNEQSLREQFVDASYDAALNLRLRIAHQKDRE 104
           Y+LWKDEY++MEKV   + +     LWRV+  +L E  +D  Y A+LNL+LR+AH+ +  
Sbjct: 413 YRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEEN 472

Query: 103 KEVVQTAEER---------ERLEKVREIFESSLMKLDDVILLF 2
           KE++   ++             E VR +  SSL+KLDD ++LF
Sbjct: 473 KELLSLPKDNNNKPLVKKMHHFENVRNLLRSSLVKLDDALMLF 515


>ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
           [Cucumis sativus]
          Length = 518

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 12/103 (11%)
 Frame = -2

Query: 274 YKLWKDEYIHMEKV---LTKELQIFLWRVNEQSLREQFVDASYDAALNLRLRIAHQKDRE 104
           Y+LWKDEY++MEKV   + +     LWRV+  +L E  +D  Y A+LNL+LR+AH+ +  
Sbjct: 413 YRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEEN 472

Query: 103 KEVVQTAEER---------ERLEKVREIFESSLMKLDDVILLF 2
           KE++   ++             E VR +  SSL+KLDD ++LF
Sbjct: 473 KELLSLPKDNNNKPLVKKMHHFENVRNLLRSSLVKLDDALMLF 515


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