BLASTX nr result

ID: Scutellaria23_contig00035609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00035609
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266225.1| PREDICTED: ATP-dependent DNA helicase Q-like...   235   3e-60
ref|XP_002514992.1| rothmund-thomson syndrome DNA helicase recq4...   225   3e-57
ref|XP_002315627.1| predicted protein [Populus trichocarpa] gi|2...   223   1e-56
ref|NP_174109.2| ATP-dependent DNA helicase Q-like 5 [Arabidopsi...   219   2e-55
dbj|BAE98731.1| putative ATP-dependent DNA helicase RecQ [Arabid...   219   2e-55

>ref|XP_002266225.1| PREDICTED: ATP-dependent DNA helicase Q-like 5-like [Vitis
           vinifera]
          Length = 941

 Score =  235 bits (599), Expect = 3e-60
 Identities = 118/158 (74%), Positives = 133/158 (84%)
 Frame = +3

Query: 3   EVSETLRLLQEGAIKVLFVSPERLLNAEFMSIFSGSSQLSLVVVDEAHCVSEWSHNFRPS 182
           E SETLR L+EG IKVLFVSPER LNAEF+SI S    +SLVVVDEAHCVSEWSHNFRPS
Sbjct: 380 ETSETLRQLREGTIKVLFVSPERFLNAEFLSIVSAGPPISLVVVDEAHCVSEWSHNFRPS 439

Query: 183 YMRLRASLLRGRFNAGCILAMTATATNKTLYDVMHALEIPPTNLIQSTKLRDNLHLSVTM 362
           YMRLRASLL    NA CILAMTATAT++TL+ VMHALEIP  NLIQ  +LRDNL LSV++
Sbjct: 440 YMRLRASLLHAVLNAKCILAMTATATSRTLHAVMHALEIPAANLIQKAQLRDNLQLSVSL 499

Query: 363 SGNRMKDLMALLKSSPYVNIKSIIVYCKFQSETDMISK 476
           S NRMKDLM L+KS P++ ++SII+YCKFQSETD ISK
Sbjct: 500 SKNRMKDLMMLIKSPPFIEVQSIIIYCKFQSETDSISK 537


>ref|XP_002514992.1| rothmund-thomson syndrome DNA helicase recq4, putative [Ricinus
           communis] gi|223546043|gb|EEF47546.1| rothmund-thomson
           syndrome DNA helicase recq4, putative [Ricinus communis]
          Length = 852

 Score =  225 bits (573), Expect = 3e-57
 Identities = 110/158 (69%), Positives = 137/158 (86%)
 Frame = +3

Query: 3   EVSETLRLLQEGAIKVLFVSPERLLNAEFMSIFSGSSQLSLVVVDEAHCVSEWSHNFRPS 182
           E +ETL L++EGAIKVLFVSPER LN EF+S  S +S +SL+VVDEAHC+SEWSHNFRPS
Sbjct: 337 EAAETLSLVKEGAIKVLFVSPERFLNVEFLSFISATS-ISLLVVDEAHCISEWSHNFRPS 395

Query: 183 YMRLRASLLRGRFNAGCILAMTATATNKTLYDVMHALEIPPTNLIQSTKLRDNLHLSVTM 362
           YMRLRASLLR     GCI+AMTATAT  TL  +M AL+IP +NL+Q+++LRDNL LSV++
Sbjct: 396 YMRLRASLLRSTLKVGCIIAMTATATTTTLNVIMSALDIPSSNLVQNSQLRDNLQLSVSL 455

Query: 363 SGNRMKDLMALLKSSPYVNIKSIIVYCKFQSETDMISK 476
           +GNRMKDL+ L+KSSP+V+++SIIVYCKFQSETD+IS+
Sbjct: 456 TGNRMKDLVTLIKSSPFVDVQSIIVYCKFQSETDIISR 493


>ref|XP_002315627.1| predicted protein [Populus trichocarpa] gi|222864667|gb|EEF01798.1|
           predicted protein [Populus trichocarpa]
          Length = 901

 Score =  223 bits (569), Expect = 1e-56
 Identities = 118/170 (69%), Positives = 135/170 (79%), Gaps = 12/170 (7%)
 Frame = +3

Query: 3   EVSETLRLLQEGAIKVLFVSPERLLNAEFMSIFSGSSQLSLVVVDEAHCVSEWSHNFRPS 182
           EVSETLRLLQEG IKVLFVSPER LNAEF+SI S    +SL+VVDEAHC+SEWSHNFRPS
Sbjct: 329 EVSETLRLLQEGGIKVLFVSPERFLNAEFLSILS-PIPISLLVVDEAHCISEWSHNFRPS 387

Query: 183 YMRLRASLLRGRFNAGCILAMTATATNKTLYDVMHALEIPPTNLIQSTKLRDNLHLSVTM 362
           YMRLRASLL  R N GCILAMTATAT  TL  +M ALEIP TNLIQ+ KLRDN+ LSV++
Sbjct: 388 YMRLRASLLCTRLNIGCILAMTATATTTTLNAIMSALEIPSTNLIQNAKLRDNMQLSVSL 447

Query: 363 SGNRM------------KDLMALLKSSPYVNIKSIIVYCKFQSETDMISK 476
           SGNR             KDL+ L+KS P+V ++SII+YCKFQSETD+IS+
Sbjct: 448 SGNRQLTYHHYLEFNRTKDLLTLIKSPPFVELQSIIIYCKFQSETDIISR 497


>ref|NP_174109.2| ATP-dependent DNA helicase Q-like 5 [Arabidopsis thaliana]
           gi|298289257|sp|Q0WVW7.2|RQL5_ARATH RecName:
           Full=ATP-dependent DNA helicase Q-like 5; AltName:
           Full=RecQ-like protein 5; Short=AtRecQ5; Short=AtRecQl5
           gi|332192766|gb|AEE30887.1| ATP-dependent DNA helicase
           Q-like 5 [Arabidopsis thaliana]
          Length = 911

 Score =  219 bits (557), Expect = 2e-55
 Identities = 114/159 (71%), Positives = 130/159 (81%), Gaps = 1/159 (0%)
 Frame = +3

Query: 3   EVSETLRLLQEGAIKVLFVSPERLLNAEFMSIFSGSSQLSLVVVDEAHCVSEWSHNFRPS 182
           E +ETLR L+EG IKVLFVSPERLLN EF+S+F  S  +SLVVVDEAHCVSEWSHNFRPS
Sbjct: 346 EATETLRKLKEGIIKVLFVSPERLLNVEFLSMFRMSLSVSLVVVDEAHCVSEWSHNFRPS 405

Query: 183 YMRLRASLLRGRFNAGCILAMTATATNKTLYDVMHALEIPPTNLIQSTKLRDNLHLSVTM 362
           YMRL+AS+L     A CILAMTATAT  TL  VM +LEIP TNLIQ ++LRDN  LSV++
Sbjct: 406 YMRLKASMLFSELKAECILAMTATATTMTLQAVMSSLEIPSTNLIQKSQLRDNFELSVSL 465

Query: 363 SG-NRMKDLMALLKSSPYVNIKSIIVYCKFQSETDMISK 476
           SG NRMKDL+ L++S PY  I+SIIVYCKFQ ETDMISK
Sbjct: 466 SGANRMKDLLILMESPPYKEIRSIIVYCKFQYETDMISK 504


>dbj|BAE98731.1| putative ATP-dependent DNA helicase RecQ [Arabidopsis thaliana]
          Length = 911

 Score =  219 bits (557), Expect = 2e-55
 Identities = 114/159 (71%), Positives = 130/159 (81%), Gaps = 1/159 (0%)
 Frame = +3

Query: 3   EVSETLRLLQEGAIKVLFVSPERLLNAEFMSIFSGSSQLSLVVVDEAHCVSEWSHNFRPS 182
           E +ETLR L+EG IKVLFVSPERLLN EF+S+F  S  +SLVVVDEAHCVSEWSHNFRPS
Sbjct: 346 EATETLRKLKEGIIKVLFVSPERLLNVEFLSMFRMSLSVSLVVVDEAHCVSEWSHNFRPS 405

Query: 183 YMRLRASLLRGRFNAGCILAMTATATNKTLYDVMHALEIPPTNLIQSTKLRDNLHLSVTM 362
           YMRL+AS+L     A CILAMTATAT  TL  VM +LEIP TNLIQ ++LRDN  LSV++
Sbjct: 406 YMRLKASMLFSELKAECILAMTATATTMTLQAVMSSLEIPSTNLIQKSQLRDNFELSVSL 465

Query: 363 SG-NRMKDLMALLKSSPYVNIKSIIVYCKFQSETDMISK 476
           SG NRMKDL+ L++S PY  I+SIIVYCKFQ ETDMISK
Sbjct: 466 SGANRMKDLLILMESPPYKEIRSIIVYCKFQYETDMISK 504


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