BLASTX nr result

ID: Scutellaria23_contig00035524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00035524
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302996.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002305180.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
emb|CAN62773.1| hypothetical protein VITISV_028724 [Vitis vinifera]    57   2e-06

>ref|XP_002302996.1| predicted protein [Populus trichocarpa] gi|222844722|gb|EEE82269.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/51 (58%), Positives = 44/51 (86%), Gaps = 2/51 (3%)
 Frame = +3

Query: 99  SRRSMKVARFGGA-KRSWRLRLAPKLRLIK-LASPLKLWSKLKNAYMSMML 245
           +R+++KV RFGG+ +R W+++  PKLR++K +ASPLKL SKLKNAY++MML
Sbjct: 30  ARKNIKVTRFGGSPRRVWKIKAVPKLRILKSIASPLKLMSKLKNAYINMML 80


>ref|XP_002305180.1| predicted protein [Populus trichocarpa] gi|222848144|gb|EEE85691.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/51 (54%), Positives = 42/51 (82%), Gaps = 2/51 (3%)
 Frame = +3

Query: 99  SRRSMKVARFGGA-KRSWRLRLAPKLRLIK-LASPLKLWSKLKNAYMSMML 245
           +R++  VARFGG+ +R+W+++  PKLR++K +ASP KL  KLKNAY+SM+L
Sbjct: 30  ARKNTNVARFGGSPRRTWKIKAVPKLRILKNIASPTKLLRKLKNAYISMIL 80


>emb|CAN62773.1| hypothetical protein VITISV_028724 [Vitis vinifera]
          Length = 113

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/52 (57%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = +3

Query: 99  SRRSMKVARFGGAKRS-WRLRLAPKLRLIKLASPLKLWSKLKNAYMSMMLRL 251
           ++R++K+ R GG +R  WR+R  PKL L K+ SPLKL +KLKNAY+SMML L
Sbjct: 28  NKRNVKMVRLGGKQRRFWRIRQIPKLHL-KIISPLKLLAKLKNAYVSMMLNL 78


Top