BLASTX nr result

ID: Scutellaria23_contig00035418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00035418
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp....    98   6e-19
ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis th...    98   6e-19
ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus comm...    96   4e-18
ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...    94   1e-17
emb|CBI20904.3| unnamed protein product [Vitis vinifera]               94   1e-17

>ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315090|gb|EFH45513.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 2147

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 45/54 (83%), Positives = 49/54 (90%)
 Frame = +3

Query: 66  PLEICHVYNKKGISILYPWQVDCLQVEGVLHNRNLVYCASTSAGKSFVAEILML 227
           P E+C VYNKKGIS LYPWQV+CLQV+GVL  RNLVYCASTSAGKSFVAE+LML
Sbjct: 499 PSEVCSVYNKKGISKLYPWQVECLQVDGVLQKRNLVYCASTSAGKSFVAEVLML 552


>ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis thaliana]
           gi|62241195|dbj|BAD93700.1| helicase and polymerase
           containing protein TEBICHI [Arabidopsis thaliana]
           gi|332660705|gb|AEE86105.1| DNA polymerase theta subunit
           [Arabidopsis thaliana]
          Length = 2154

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 45/54 (83%), Positives = 49/54 (90%)
 Frame = +3

Query: 66  PLEICHVYNKKGISILYPWQVDCLQVEGVLHNRNLVYCASTSAGKSFVAEILML 227
           P E+C VYNKKGIS LYPWQV+CLQV+GVL  RNLVYCASTSAGKSFVAE+LML
Sbjct: 500 PSEVCSVYNKKGISKLYPWQVECLQVDGVLQKRNLVYCASTSAGKSFVAEVLML 553


>ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus communis]
           gi|223544402|gb|EEF45923.1| DNA polymerase theta,
           putative [Ricinus communis]
          Length = 2154

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 43/54 (79%), Positives = 48/54 (88%)
 Frame = +3

Query: 66  PLEICHVYNKKGISILYPWQVDCLQVEGVLHNRNLVYCASTSAGKSFVAEILML 227
           P E+C +Y ++GIS LYPWQVDCLQV+GVL  RNLVYCASTSAGKSFVAEILML
Sbjct: 491 PAEVCSIYKRRGISKLYPWQVDCLQVDGVLQRRNLVYCASTSAGKSFVAEILML 544


>ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis
           vinifera]
          Length = 2181

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/54 (81%), Positives = 48/54 (88%)
 Frame = +3

Query: 66  PLEICHVYNKKGISILYPWQVDCLQVEGVLHNRNLVYCASTSAGKSFVAEILML 227
           P EIC++Y KKGIS LY WQVDCL+V+GVL  RNLVYCASTSAGKSFVAEILML
Sbjct: 509 PSEICNIYRKKGISKLYSWQVDCLKVDGVLQKRNLVYCASTSAGKSFVAEILML 562


>emb|CBI20904.3| unnamed protein product [Vitis vinifera]
          Length = 2091

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/54 (81%), Positives = 48/54 (88%)
 Frame = +3

Query: 66  PLEICHVYNKKGISILYPWQVDCLQVEGVLHNRNLVYCASTSAGKSFVAEILML 227
           P EIC++Y KKGIS LY WQVDCL+V+GVL  RNLVYCASTSAGKSFVAEILML
Sbjct: 491 PSEICNIYRKKGISKLYSWQVDCLKVDGVLQKRNLVYCASTSAGKSFVAEILML 544


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