BLASTX nr result

ID: Scutellaria23_contig00035050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00035050
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containi...    56   4e-06
ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like, partial [Vitis vinifera]
          Length = 621

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/73 (43%), Positives = 51/73 (69%)
 Frame = +2

Query: 11  STKPVKSFLRSSRNEEPLIKLSERDGKFSESVNHLCQQKRLKDLVQLLEDHLSQPSAALY 190
           S  P+ +    S  ++ L+K   +D  F E+++ LC+QKRL++ +Q+L DH+ +PSAA Y
Sbjct: 34  SKPPIHNTFFKSGAKDELVKRLCKDNNFKEAIDILCEQKRLREAIQIL-DHVDRPSAATY 92

Query: 191 STILQLCIEKRAL 229
           ST+LQLC++ RAL
Sbjct: 93  STLLQLCLQLRAL 105


>ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/66 (43%), Positives = 39/66 (59%)
 Frame = +2

Query: 32  FLRSSRNEEPLIKLSERDGKFSESVNHLCQQKRLKDLVQLLEDHLSQPSAALYSTILQLC 211
           F    RN      L   D KF E+V+ LCQQKR+K+ V+LL     +PSA +YST++  C
Sbjct: 38  FRNDKRNHLNPKDLVSEDNKFEEAVDVLCQQKRVKEAVELLHRTDHRPSARVYSTLIAAC 97

Query: 212 IEKRAL 229
           +  RAL
Sbjct: 98  VRHRAL 103


>ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|222867101|gb|EEF04232.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/68 (38%), Positives = 45/68 (66%)
 Frame = +2

Query: 26  KSFLRSSRNEEPLIKLSERDGKFSESVNHLCQQKRLKDLVQLLEDHLSQPSAALYSTILQ 205
           K+F +S+  +  L+       +F E+++ LCQQ RLK+ +Q+L   + +PSA++YST++Q
Sbjct: 20  KTFFKSNTKDTTLVPHLCNHKRFDEAIHILCQQNRLKEALQILH-QIDKPSASVYSTLIQ 78

Query: 206 LCIEKRAL 229
            CI+ R L
Sbjct: 79  SCIKSRLL 86


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