BLASTX nr result

ID: Scutellaria23_contig00035017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00035017
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containi...   194   5e-48
emb|CBI26569.3| unnamed protein product [Vitis vinifera]              194   5e-48
ref|XP_002519998.1| pentatricopeptide repeat-containing protein,...   194   6e-48
ref|XP_004164250.1| PREDICTED: putative pentatricopeptide repeat...   183   1e-44
ref|XP_004146932.1| PREDICTED: putative pentatricopeptide repeat...   183   1e-44

>ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Vitis vinifera]
          Length = 494

 Score =  194 bits (494), Expect = 5e-48
 Identities = 90/119 (75%), Positives = 113/119 (94%)
 Frame = +3

Query: 3   CVLANAYAQQGLCEQTVKVLQLMETEGMEMNVIMLNVLINGFATAGRHMEALSIYHHMKE 182
           CVLANAYAQQGLCEQTVKVLQLMETEG+E N+IMLN+LIN F  AGRH+EALS+YHH+K+
Sbjct: 342 CVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGIAGRHLEALSVYHHIKD 401

Query: 183 SGISPDVVTYSTLMKAFMWAKKFDQVPKIYKEMEASGCSPDRKAREMLKSALIILERKH 359
           +GISPDVVTYSTLMKA + A+KFD+VP+IY+EME++GC+PDRKAREML++AL++L+++H
Sbjct: 402 TGISPDVVTYSTLMKACIRARKFDKVPEIYEEMESAGCTPDRKAREMLQTALLVLQQRH 460


>emb|CBI26569.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  194 bits (494), Expect = 5e-48
 Identities = 90/119 (75%), Positives = 113/119 (94%)
 Frame = +3

Query: 3   CVLANAYAQQGLCEQTVKVLQLMETEGMEMNVIMLNVLINGFATAGRHMEALSIYHHMKE 182
           CVLANAYAQQGLCEQTVKVLQLMETEG+E N+IMLN+LIN F  AGRH+EALS+YHH+K+
Sbjct: 263 CVLANAYAQQGLCEQTVKVLQLMETEGIEPNLIMLNMLINAFGIAGRHLEALSVYHHIKD 322

Query: 183 SGISPDVVTYSTLMKAFMWAKKFDQVPKIYKEMEASGCSPDRKAREMLKSALIILERKH 359
           +GISPDVVTYSTLMKA + A+KFD+VP+IY+EME++GC+PDRKAREML++AL++L+++H
Sbjct: 323 TGISPDVVTYSTLMKACIRARKFDKVPEIYEEMESAGCTPDRKAREMLQTALLVLQQRH 381


>ref|XP_002519998.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540762|gb|EEF42322.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 498

 Score =  194 bits (493), Expect = 6e-48
 Identities = 93/119 (78%), Positives = 110/119 (92%)
 Frame = +3

Query: 3   CVLANAYAQQGLCEQTVKVLQLMETEGMEMNVIMLNVLINGFATAGRHMEALSIYHHMKE 182
           CVLANAYAQQGLCEQTVKVLQLME EG+E N+IMLNVLIN F  AGRH EALSIYHHMKE
Sbjct: 340 CVLANAYAQQGLCEQTVKVLQLMEAEGIEPNLIMLNVLINAFGIAGRHREALSIYHHMKE 399

Query: 183 SGISPDVVTYSTLMKAFMWAKKFDQVPKIYKEMEASGCSPDRKAREMLKSALIILERKH 359
           SGISPDVVTYSTLMKA++ A+KFD+VP+IY EME+SGC+PD+KARE+L++AL++L R++
Sbjct: 400 SGISPDVVTYSTLMKAYIRARKFDEVPEIYSEMESSGCTPDKKAREILQAALMVLGRRN 458



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/97 (26%), Positives = 56/97 (57%)
 Frame = +3

Query: 21  YAQQGLCEQTVKVLQLMETEGMEMNVIMLNVLINGFATAGRHMEALSIYHHMKESGISPD 200
           Y   G+ ++ + +++ +   GM ++  + N +I+ F   G   EAL +  +M++ GI+PD
Sbjct: 171 YRDNGMWKKAIGIIEEIREMGMPLDKHIYNSIIDTFGKYGELDEALEVLSNMQQQGITPD 230

Query: 201 VVTYSTLMKAFMWAKKFDQVPKIYKEMEASGCSPDRK 311
           +VT+++L++    A    +  +++ +M+A G  PD K
Sbjct: 231 IVTWNSLIRWHCKAGNLSKALELFSKMQAQGLYPDPK 267


>ref|XP_004164250.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g36300-like [Cucumis sativus]
          Length = 433

 Score =  183 bits (465), Expect = 1e-44
 Identities = 88/120 (73%), Positives = 107/120 (89%), Gaps = 1/120 (0%)
 Frame = +3

Query: 3   CVLANAYAQQGLCEQTVKVLQLMETEGMEMNVIMLNVLINGFATAGRHMEALSIYHHMKE 182
           C++ANA+AQQGLCE+TVKVLQLME EG+E N++MLNVLIN FA AGRH EAL+IYHH+ E
Sbjct: 265 CIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIE 324

Query: 183 -SGISPDVVTYSTLMKAFMWAKKFDQVPKIYKEMEASGCSPDRKAREMLKSALIILERKH 359
             GISPDV+TY+TLMKAF+ AKKF +VP+IYKEME++GC+PDRKAREMLKS   ILE++H
Sbjct: 325 VKGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRH 384


>ref|XP_004146932.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g36300-like [Cucumis sativus]
          Length = 455

 Score =  183 bits (465), Expect = 1e-44
 Identities = 88/120 (73%), Positives = 107/120 (89%), Gaps = 1/120 (0%)
 Frame = +3

Query: 3   CVLANAYAQQGLCEQTVKVLQLMETEGMEMNVIMLNVLINGFATAGRHMEALSIYHHMKE 182
           C++ANA+AQQGLCE+TVKVLQLME EG+E N++MLNVLIN FA AGRH EAL+IYHH+ E
Sbjct: 265 CIIANAFAQQGLCEETVKVLQLMEAEGIEPNLVMLNVLINAFAVAGRHSEALAIYHHIIE 324

Query: 183 -SGISPDVVTYSTLMKAFMWAKKFDQVPKIYKEMEASGCSPDRKAREMLKSALIILERKH 359
             GISPDV+TY+TLMKAF+ AKKF +VP+IYKEME++GC+PDRKAREMLKS   ILE++H
Sbjct: 325 VKGISPDVITYTTLMKAFIRAKKFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQRH 384


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