BLASTX nr result

ID: Scutellaria23_contig00034919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00034919
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303480.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_002519901.1| pentatricopeptide repeat-containing protein,...    85   7e-15
ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containi...    82   3e-14
ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    80   2e-13
ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12

>ref|XP_002303480.1| predicted protein [Populus trichocarpa] gi|222840912|gb|EEE78459.1|
           predicted protein [Populus trichocarpa]
          Length = 836

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 49/102 (48%), Positives = 66/102 (64%)
 Frame = +1

Query: 1   VDGKLSMSLRDDVVNVDKEITVVLADTCLGSDKFRNVGRGFDILVHVYASEFKSLGFDVV 180
           +DGK+      +  +   EI  ++AD  L  +    V +  D+LVHVY+++FK LGF   
Sbjct: 147 IDGKVPAFYARNFESRHFEIAQIMADFNLVFEPVIGV-KIADLLVHVYSTQFKHLGFGFA 205

Query: 181 MDVFRLLAGRGLVPSFKTCTFLMSSLVKGNEPEKSYEVFDIV 306
            DVF LLA +GL PS KTCTFL+SSLVK NE +KSYEV+D +
Sbjct: 206 ADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFI 247


>ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540947|gb|EEF42505.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 777

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 38/61 (62%), Positives = 50/61 (81%)
 Frame = +1

Query: 124 DILVHVYASEFKSLGFDVVMDVFRLLAGRGLVPSFKTCTFLMSSLVKGNEPEKSYEVFDI 303
           D+L+HVY+++FK LGF VV ++F LLA +GL PS KTC FL+SSLVK NE + SY+VFDI
Sbjct: 128 DLLIHVYSTQFKHLGFGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDI 187

Query: 304 V 306
           +
Sbjct: 188 M 188


>ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 49/109 (44%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
 Frame = +1

Query: 1   VDGKLSMSLRDDVVNVDKE-ITVVLADTCLGSDKFRNVGR-----GFDILVHVYASEFKS 162
           +DG L       V+N+D E   + +A+   G      VGR      FD+L+HVY+++F++
Sbjct: 136 IDGNLP------VLNLDSEKFHIEIANALFGLTSV--VGRFEWTQAFDLLIHVYSTQFRN 187

Query: 163 LGFDVVMDVFRLLAGRGLVPSFKTCTFLMSSLVKGNEPEKSYEVFDIVS 309
           LGF   +DVF LLA +G  PS KTC FL+SSLVK NE EK  EVF ++S
Sbjct: 188 LGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMS 236


>ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 45/97 (46%), Positives = 62/97 (63%), Gaps = 6/97 (6%)
 Frame = +1

Query: 37  VVNVDKE-ITVVLADTCLGSDKFRNVGR-----GFDILVHVYASEFKSLGFDVVMDVFRL 198
           V+N+D E   + +A+   G      VGR      FD+L+HVY+++F++LGF   +DVF L
Sbjct: 119 VLNLDSEKFHIEIANALFGLTSV--VGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYL 176

Query: 199 LAGRGLVPSFKTCTFLMSSLVKGNEPEKSYEVFDIVS 309
           LA +G  PS KTC F +SSLVK NE EK  EVF ++S
Sbjct: 177 LARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMS 213


>ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 34/59 (57%), Positives = 47/59 (79%)
 Frame = +1

Query: 124 DILVHVYASEFKSLGFDVVMDVFRLLAGRGLVPSFKTCTFLMSSLVKGNEPEKSYEVFD 300
           D+L+HVY ++F+++GF   + VFR LA +G+ P+ KTCTFL+SSLVK NE EKSY VF+
Sbjct: 245 DLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFE 303


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