BLASTX nr result
ID: Scutellaria23_contig00034919
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Scutellaria23_contig00034919 (314 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002303480.1| predicted protein [Populus trichocarpa] gi|2... 89 5e-16 ref|XP_002519901.1| pentatricopeptide repeat-containing protein,... 85 7e-15 ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containi... 82 3e-14 ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 80 2e-13 ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12 >ref|XP_002303480.1| predicted protein [Populus trichocarpa] gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa] Length = 836 Score = 88.6 bits (218), Expect = 5e-16 Identities = 49/102 (48%), Positives = 66/102 (64%) Frame = +1 Query: 1 VDGKLSMSLRDDVVNVDKEITVVLADTCLGSDKFRNVGRGFDILVHVYASEFKSLGFDVV 180 +DGK+ + + EI ++AD L + V + D+LVHVY+++FK LGF Sbjct: 147 IDGKVPAFYARNFESRHFEIAQIMADFNLVFEPVIGV-KIADLLVHVYSTQFKHLGFGFA 205 Query: 181 MDVFRLLAGRGLVPSFKTCTFLMSSLVKGNEPEKSYEVFDIV 306 DVF LLA +GL PS KTCTFL+SSLVK NE +KSYEV+D + Sbjct: 206 ADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFI 247 >ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 777 Score = 84.7 bits (208), Expect = 7e-15 Identities = 38/61 (62%), Positives = 50/61 (81%) Frame = +1 Query: 124 DILVHVYASEFKSLGFDVVMDVFRLLAGRGLVPSFKTCTFLMSSLVKGNEPEKSYEVFDI 303 D+L+HVY+++FK LGF VV ++F LLA +GL PS KTC FL+SSLVK NE + SY+VFDI Sbjct: 128 DLLIHVYSTQFKHLGFGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDI 187 Query: 304 V 306 + Sbjct: 188 M 188 >ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucumis sativus] Length = 822 Score = 82.4 bits (202), Expect = 3e-14 Identities = 49/109 (44%), Positives = 67/109 (61%), Gaps = 6/109 (5%) Frame = +1 Query: 1 VDGKLSMSLRDDVVNVDKE-ITVVLADTCLGSDKFRNVGR-----GFDILVHVYASEFKS 162 +DG L V+N+D E + +A+ G VGR FD+L+HVY+++F++ Sbjct: 136 IDGNLP------VLNLDSEKFHIEIANALFGLTSV--VGRFEWTQAFDLLIHVYSTQFRN 187 Query: 163 LGFDVVMDVFRLLAGRGLVPSFKTCTFLMSSLVKGNEPEKSYEVFDIVS 309 LGF +DVF LLA +G PS KTC FL+SSLVK NE EK EVF ++S Sbjct: 188 LGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMS 236 >ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g19440, chloroplastic-like [Cucumis sativus] Length = 799 Score = 80.1 bits (196), Expect = 2e-13 Identities = 45/97 (46%), Positives = 62/97 (63%), Gaps = 6/97 (6%) Frame = +1 Query: 37 VVNVDKE-ITVVLADTCLGSDKFRNVGR-----GFDILVHVYASEFKSLGFDVVMDVFRL 198 V+N+D E + +A+ G VGR FD+L+HVY+++F++LGF +DVF L Sbjct: 119 VLNLDSEKFHIEIANALFGLTSV--VGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYL 176 Query: 199 LAGRGLVPSFKTCTFLMSSLVKGNEPEKSYEVFDIVS 309 LA +G PS KTC F +SSLVK NE EK EVF ++S Sbjct: 177 LARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMS 213 >ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440, chloroplastic [Vitis vinifera] Length = 1022 Score = 76.6 bits (187), Expect = 2e-12 Identities = 34/59 (57%), Positives = 47/59 (79%) Frame = +1 Query: 124 DILVHVYASEFKSLGFDVVMDVFRLLAGRGLVPSFKTCTFLMSSLVKGNEPEKSYEVFD 300 D+L+HVY ++F+++GF + VFR LA +G+ P+ KTCTFL+SSLVK NE EKSY VF+ Sbjct: 245 DLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFE 303