BLASTX nr result

ID: Scutellaria23_contig00034897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00034897
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|2...   142   6e-32
ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containi...   136   3e-30
gb|ACU21279.1| unknown [Glycine max]                                  133   2e-29
ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containi...   127   2e-27
ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp....   125   8e-27

>ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|222874911|gb|EEF12042.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score =  142 bits (357), Expect = 6e-32
 Identities = 70/118 (59%), Positives = 89/118 (75%)
 Frame = -3

Query: 612 NIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLHNEMLRQGCEPDIITYT 433
           NI  A++LK +ML   LFPD+VTYNLLIGAA   G I YALQL++EMLR GC PD+ITYT
Sbjct: 383 NILYAYFLKKDMLLKGLFPDVVTYNLLIGAAAHAGHIHYALQLYDEMLRGGCNPDMITYT 442

Query: 432 ELLKCYCMRSKMREADELFFKVLTSNLQIDHVPFIILMKKYFKLGELDTVYELYRIWL 259
           EL++ YC++   +EA+EL  K+L S L IDHVPF IL+K+Y K+ E D  ++LYR WL
Sbjct: 443 ELIRGYCVKYNTKEAEELLAKLLKSGLLIDHVPFQILIKQYCKMKEPDRAFQLYRKWL 500



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/94 (29%), Positives = 51/94 (54%)
 Frame = -3

Query: 600 AHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLHNEMLRQGCEPDIITYTELLK 421
           A +L+++M+     PD++T+N ++   C + ++  A  L  EML +G  P+  TY   +K
Sbjct: 83  ALWLRSKMIQKGFVPDVLTHNYMVNGLCKMIELEKADWLIREMLDKGPSPNCATYNTFIK 142

Query: 420 CYCMRSKMREADELFFKVLTSNLQIDHVPFIILM 319
            YC+  K+ +A  LF  +  S  + + V F  L+
Sbjct: 143 GYCLLDKVDKALHLFSSMANSGTKPNRVTFNTLL 176


>ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Glycine max]
          Length = 577

 Score =  136 bits (343), Expect = 3e-30
 Identities = 65/118 (55%), Positives = 87/118 (73%)
 Frame = -3

Query: 612 NIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLHNEMLRQGCEPDIITYT 433
           N   A  LK EM+S CLFPD+VTYNLLIGAAC++G + +AL LH++M+++G EPD+ITYT
Sbjct: 452 NFHGACSLKEEMISKCLFPDVVTYNLLIGAACNIGRLDFALLLHDQMVQRGYEPDLITYT 511

Query: 432 ELLKCYCMRSKMREADELFFKVLTSNLQIDHVPFIILMKKYFKLGELDTVYELYRIWL 259
           EL++ +C+R KM+EA+EL+ K+L S L  DHVP  IL  KY KL E    +  Y+ WL
Sbjct: 512 ELVRGFCIRGKMKEAEELYAKILKSGLLNDHVPVQILFNKYCKLKEPVIAFNFYQDWL 569


>gb|ACU21279.1| unknown [Glycine max]
          Length = 112

 Score =  133 bits (335), Expect = 2e-29
 Identities = 62/107 (57%), Positives = 82/107 (76%)
 Frame = -3

Query: 579 MLSNCLFPDLVTYNLLIGAACDLGDISYALQLHNEMLRQGCEPDIITYTELLKCYCMRSK 400
           M+S CLFPD+VTYNLLIGAAC++G   +ALQLHNEM+++G EPD+ITYTEL++ +C R K
Sbjct: 1   MISKCLFPDVVTYNLLIGAACNIGRPDFALQLHNEMVQRGYEPDLITYTELVRGFCTRGK 60

Query: 399 MREADELFFKVLTSNLQIDHVPFIILMKKYFKLGELDTVYELYRIWL 259
           M+EA+EL+ K+L S L  DHVP  I+  KY KL E    ++ Y+ WL
Sbjct: 61  MKEAEELYAKILKSGLLNDHVPVQIIFNKYCKLEEPVRAFKFYQDWL 107


>ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score =  127 bits (318), Expect = 2e-27
 Identities = 62/116 (53%), Positives = 85/116 (73%)
 Frame = -3

Query: 612 NIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLHNEMLRQGCEPDIITYT 433
           NI  AH +K EML N ++PD+VTYNLLIGAAC+ G I +AL+L++EMLR+G EPDIITYT
Sbjct: 464 NIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYEPDIITYT 523

Query: 432 ELLKCYCMRSKMREADELFFKVLTSNLQIDHVPFIILMKKYFKLGELDTVYELYRI 265
           EL++ +C+R  + EA+EL  K+  S L IDH PF IL++KY +       Y+L ++
Sbjct: 524 ELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAPFQILIQKYCRTRVPGRAYDLTKL 579



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/109 (30%), Positives = 56/109 (51%)
 Frame = -3

Query: 600 AHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLHNEMLRQGCEPDIITYTELLK 421
           A +L+ +M+   + PD++T+N L+   C  GD+  A  L  EML  G  P+  T+   +K
Sbjct: 150 ALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATFNTFIK 209

Query: 420 CYCMRSKMREADELFFKVLTSNLQIDHVPFIILMKKYFKLGELDTVYEL 274
            YC+ + + +A  LF  +  S +  + V + IL+    K G L    +L
Sbjct: 210 GYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKL 258



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
 Frame = -3

Query: 612 NIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLHNEMLRQGC---EPDII 442
           N+DKA YL + M ++ + P+ VTYN+LI A C  G +  A +L  ++L   C     DII
Sbjct: 216 NVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILDDDCGKETSDII 275

Query: 441 TYTELLKCYCMRSKMREADELFFKVLTSNLQIDHVPFIILMKKYFKLGELDTVYELYRIW 262
           T T  +     +  M +A   + ++L    QID V + +L+  +  + ++++ Y  +   
Sbjct: 276 TSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEM 335

Query: 261 LRRGL 247
            +RGL
Sbjct: 336 FKRGL 340



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/89 (29%), Positives = 47/89 (52%)
 Frame = -3

Query: 612 NIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLHNEMLRQGCEPDIITYT 433
           +++ A+    EM    L PD+ TYN LI   C +G++  A  +H  M + G  PD+I+Y 
Sbjct: 324 DMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYK 383

Query: 432 ELLKCYCMRSKMREADELFFKVLTSNLQI 346
            +++  C+   +  A++ F   +  NL +
Sbjct: 384 MIIQGLCIHGDVIRANQ-FLVCMLENLMV 411


>ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317966|gb|EFH48388.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 588

 Score =  125 bits (313), Expect = 8e-27
 Identities = 56/114 (49%), Positives = 82/114 (71%)
 Frame = -3

Query: 600 AHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLHNEMLRQGCEPDIITYTELLK 421
           A ++K EM S  + PD  TYNLL+GAAC LG +  A QL++EML++GC+PDIITYTEL++
Sbjct: 457 AWWVKNEMRSTKIHPDTTTYNLLVGAACTLGHLRLAFQLYDEMLKRGCQPDIITYTELVR 516

Query: 420 CYCMRSKMREADELFFKVLTSNLQIDHVPFIILMKKYFKLGELDTVYELYRIWL 259
             C + +++EA+ L  ++  S + +DHVPF+IL+KKY +L   D  Y +Y+ WL
Sbjct: 517 GLCWKGRLKEAESLLSRMQVSGITMDHVPFLILVKKYTRLQRPDEAYLVYKKWL 570



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/122 (25%), Positives = 58/122 (47%)
 Frame = -3

Query: 612 NIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLHNEMLRQGCEPDIITYT 433
           N+  A+    +M+   + PD+ TYN LI A C  G    A  LH  M   G  PD I+Y 
Sbjct: 313 NMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVACDLHGTMQNVGVAPDQISYK 372

Query: 432 ELLKCYCMRSKMREADELFFKVLTSNLQIDHVPFIILMKKYFKLGELDTVYELYRIWLRR 253
            +++  C++  +  A+E    +L  +L  + + + +++  Y + G+      +  + L  
Sbjct: 373 VIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTSCALSVLNLMLSY 432

Query: 252 GL 247
           G+
Sbjct: 433 GV 434


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