BLASTX nr result

ID: Scutellaria23_contig00034824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00034824
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283336.1| PREDICTED: F-box protein At3g12350 [Vitis vi...   174   1e-41
emb|CAN72848.1| hypothetical protein VITISV_013938 [Vitis vinifera]   174   1e-41
ref|XP_004142896.1| PREDICTED: F-box protein At3g12350-like [Cuc...   173   1e-41
ref|XP_002301146.1| predicted protein [Populus trichocarpa] gi|2...   158   6e-37
gb|ABK92530.1| unknown [Populus trichocarpa]                          158   6e-37

>ref|XP_002283336.1| PREDICTED: F-box protein At3g12350 [Vitis vinifera]
          Length = 469

 Score =  174 bits (440), Expect = 1e-41
 Identities = 89/141 (63%), Positives = 101/141 (71%)
 Frame = -1

Query: 429 ETVIPLSFSDFPDDVQLCVLSFLRPSDLAAFACTCKRFDSLYRRDQRLWFSLCHRRWGSK 250
           + V  +SFSDFP+DVQLC+LSFL PS++A FACT KRF SL   D +LWF+LC RRWGSK
Sbjct: 7   DAVTSVSFSDFPEDVQLCILSFLTPSEIATFACTSKRFLSLCTCDSKLWFTLCDRRWGSK 66

Query: 249 TLINKWGSGKISYRRLYRILDEYENLVGFWRRSGDVXXXXXXXXXXXXFEWGPFYITGSR 70
           T I KWGSGKI+YR LYR L E+ENL+GFWRRSG V            FEW P +I GSR
Sbjct: 67  TQIKKWGSGKITYRLLYRTLIEWENLIGFWRRSGQV-TLGVASPPLIFFEWCPSFIIGSR 125

Query: 69  VSPSRNRGYAVITKPFLWMSI 7
           VSPSR   Y VI  PFL MSI
Sbjct: 126 VSPSRLGTYHVIKAPFLCMSI 146


>emb|CAN72848.1| hypothetical protein VITISV_013938 [Vitis vinifera]
          Length = 469

 Score =  174 bits (440), Expect = 1e-41
 Identities = 89/141 (63%), Positives = 101/141 (71%)
 Frame = -1

Query: 429 ETVIPLSFSDFPDDVQLCVLSFLRPSDLAAFACTCKRFDSLYRRDQRLWFSLCHRRWGSK 250
           + V  +SFSDFP+DVQLC+LSFL PS++A FACT KRF SL   D +LWF+LC RRWGSK
Sbjct: 7   DAVTSVSFSDFPEDVQLCILSFLTPSEIATFACTSKRFLSLCTCDSKLWFTLCDRRWGSK 66

Query: 249 TLINKWGSGKISYRRLYRILDEYENLVGFWRRSGDVXXXXXXXXXXXXFEWGPFYITGSR 70
           T I KWGSGKI+YR LYR L E+ENL+GFWRRSG V            FEW P +I GSR
Sbjct: 67  TQIKKWGSGKITYRLLYRTLIEWENLIGFWRRSGQV-TLGVASPPLIFFEWCPSFIIGSR 125

Query: 69  VSPSRNRGYAVITKPFLWMSI 7
           VSPSR   Y VI  PFL MSI
Sbjct: 126 VSPSRLGTYHVIKAPFLCMSI 146


>ref|XP_004142896.1| PREDICTED: F-box protein At3g12350-like [Cucumis sativus]
           gi|449482721|ref|XP_004156384.1| PREDICTED: F-box
           protein At3g12350-like [Cucumis sativus]
          Length = 465

 Score =  173 bits (439), Expect = 1e-41
 Identities = 79/137 (57%), Positives = 100/137 (72%)
 Frame = -1

Query: 411 SFSDFPDDVQLCVLSFLRPSDLAAFACTCKRFDSLYRRDQRLWFSLCHRRWGSKTLINKW 232
           SF+DFP+DVQLC+LSFL PSD+A F+CT KRF SL R D++LWF++C R+WGSKT I  W
Sbjct: 15  SFTDFPEDVQLCILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTMCDRKWGSKTQIKNW 74

Query: 231 GSGKISYRRLYRILDEYENLVGFWRRSGDVXXXXXXXXXXXXFEWGPFYITGSRVSPSRN 52
           G GKI+YR LY+ L ++ENL+GFWRRSG              FEWGP ++ G RVSPS+N
Sbjct: 75  GKGKITYRLLYKTLHQWENLIGFWRRSGS-STISVTSPPLVFFEWGPDFLAGCRVSPSKN 133

Query: 51  RGYAVITKPFLWMSIAS 1
             Y V   PFLWM+++S
Sbjct: 134 GTYDVFKSPFLWMTLSS 150


>ref|XP_002301146.1| predicted protein [Populus trichocarpa] gi|222842872|gb|EEE80419.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  158 bits (399), Expect = 6e-37
 Identities = 76/137 (55%), Positives = 99/137 (72%), Gaps = 1/137 (0%)
 Frame = -1

Query: 411 SFSDFPDDVQLCVLSFLRPSDLAAFACTCKRFDSLYRRDQRLWFSLCHRRWGSKTLINKW 232
           SFSDFP+DVQ C+LSFL P+++A FA T KR+  L + D +LW SLC RRWGSKT INKW
Sbjct: 8   SFSDFPEDVQFCILSFLSPTEIANFASTSKRYAPLCQSDSKLWHSLCDRRWGSKTQINKW 67

Query: 231 GSGKISYRRLYRILDEYENLVGFWRRSG-DVXXXXXXXXXXXXFEWGPFYITGSRVSPSR 55
           G+G+ISY+ LY+ L+++ENL+GFWRR G               FEWG  +++G RVSPS+
Sbjct: 68  GNGQISYKLLYKTLNKWENLIGFWRRCGQSQQKETVKPPSLVFFEWGSSFLSGWRVSPSQ 127

Query: 54  NRGYAVITKPFLWMSIA 4
           N  Y+VI  PFLW+SI+
Sbjct: 128 N-AYSVIKSPFLWISIS 143


>gb|ABK92530.1| unknown [Populus trichocarpa]
          Length = 298

 Score =  158 bits (399), Expect = 6e-37
 Identities = 76/137 (55%), Positives = 99/137 (72%), Gaps = 1/137 (0%)
 Frame = -1

Query: 411 SFSDFPDDVQLCVLSFLRPSDLAAFACTCKRFDSLYRRDQRLWFSLCHRRWGSKTLINKW 232
           SFSDFP+DVQ C+LSFL P+++A FA T KR+  L + D +LW SLC RRWGSKT INKW
Sbjct: 8   SFSDFPEDVQFCILSFLSPTEIANFASTSKRYAPLCQSDSKLWHSLCDRRWGSKTQINKW 67

Query: 231 GSGKISYRRLYRILDEYENLVGFWRRSG-DVXXXXXXXXXXXXFEWGPFYITGSRVSPSR 55
           G+G+ISY+ LY+ L+++ENL+GFWRR G               FEWG  +++G RVSPS+
Sbjct: 68  GNGQISYKLLYKTLNKWENLIGFWRRCGQSQQKETVKPPSLVFFEWGSSFLSGWRVSPSQ 127

Query: 54  NRGYAVITKPFLWMSIA 4
           N  Y+VI  PFLW+SI+
Sbjct: 128 N-AYSVIKSPFLWISIS 143


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