BLASTX nr result

ID: Scutellaria23_contig00034455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00034455
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
ref|XP_002511274.1| replication factor C / DNA polymerase III ga...    99   5e-19
emb|CBI14898.3| unnamed protein product [Vitis vinifera]               97   2e-18
ref|XP_003608912.1| DNA polymerase III subunit gamma/tau [Medica...    95   5e-18
ref|XP_003525530.1| PREDICTED: uncharacterized protein LOC100786...    94   9e-18

>ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|222858771|gb|EEE96318.1|
           predicted protein [Populus trichocarpa]
          Length = 965

 Score =  108 bits (269), Expect = 6e-22
 Identities = 61/92 (66%), Positives = 71/92 (77%), Gaps = 2/92 (2%)
 Frame = +2

Query: 5   DGASEKRRNLFGNN-SEADMQQLSHALKILSQTEKQLRMSNNQTTWLTVALLQLSS-TGS 178
           D +SE RR     + SE DMQ+LSHALKILS++EKQLRMS NQ+TWLTVALLQLSS   S
Sbjct: 585 DNSSEVRRKFSRKHASEGDMQRLSHALKILSESEKQLRMSKNQSTWLTVALLQLSSLEAS 644

Query: 179 SHDVNDARLSMRSIHPQDGDFLSTSSTSESLK 274
             DVND++ SMR+ H +DGDF ST ST ESLK
Sbjct: 645 PMDVNDSKSSMRNGHDRDGDFSSTPSTGESLK 676


>ref|XP_002511274.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223550389|gb|EEF51876.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1025

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 55/92 (59%), Positives = 69/92 (75%), Gaps = 2/92 (2%)
 Frame = +2

Query: 5   DGASEKRRNLFGNNS-EADMQQLSHALKILSQTEKQLRMSNNQTTWLTVALLQLSSTGSS 181
           + +SE RR     ++ EADMQ+LSHALK+LS+TEKQLRMS +Q+TWLTVALLQLSS  + 
Sbjct: 587 EDSSEVRRKFSSRHATEADMQRLSHALKVLSETEKQLRMSKSQSTWLTVALLQLSSLEAP 646

Query: 182 H-DVNDARLSMRSIHPQDGDFLSTSSTSESLK 274
             + ND   S+R+   +DGDF STSST ESLK
Sbjct: 647 FLNANDPNPSIRNAQDRDGDFCSTSSTGESLK 678


>emb|CBI14898.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 52/77 (67%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
 Frame = +2

Query: 5   DGASEKRRNLF-GNNSEADMQQLSHALKILSQTEKQLRMSNNQTTWLTVALLQLSSTGSS 181
           +G SE RRN F G+ SE D+Q+LSHALKILS+TEKQLR S NQTTWLTVALLQLSS  SS
Sbjct: 447 EGTSEVRRNFFEGHTSEVDLQKLSHALKILSETEKQLRASKNQTTWLTVALLQLSSVESS 506

Query: 182 H-DVNDARLSMRSIHPQ 229
             D ND+R  +R+ HP+
Sbjct: 507 FLDANDSRAFLRTEHPR 523


>ref|XP_003608912.1| DNA polymerase III subunit gamma/tau [Medicago truncatula]
           gi|355509967|gb|AES91109.1| DNA polymerase III subunit
           gamma/tau [Medicago truncatula]
          Length = 936

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 54/90 (60%), Positives = 67/90 (74%), Gaps = 3/90 (3%)
 Frame = +2

Query: 14  SEKRRNLFGNN--SEADMQQLSHALKILSQTEKQLRMSNNQTTWLTVALLQLSSTG-SSH 184
           SE RR     +  +E+ MQ+LSHAL+ILS+TEKQLR+S NQTTW T ALLQLSS   SS 
Sbjct: 576 SEIRRRFSDRHILAESSMQKLSHALRILSETEKQLRISKNQTTWFTAALLQLSSLEYSSV 635

Query: 185 DVNDARLSMRSIHPQDGDFLSTSSTSESLK 274
           D ND++L +R+   +DGD  STSST+ESLK
Sbjct: 636 DANDSKLCIRAASNRDGDLCSTSSTAESLK 665


>ref|XP_003525530.1| PREDICTED: uncharacterized protein LOC100786687 [Glycine max]
          Length = 976

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 54/91 (59%), Positives = 63/91 (69%), Gaps = 2/91 (2%)
 Frame = +2

Query: 8   GASEKRRNLFGN-NSEADMQQLSHALKILSQTEKQLRMSNNQTTWLTVALLQLSSTG-SS 181
           GASE R        SEADMQ+LSHAL+ILS+TEKQLR+S NQTTW T ALLQLSS   SS
Sbjct: 586 GASETRTRFCNRYTSEADMQKLSHALRILSETEKQLRISKNQTTWFTAALLQLSSVEYSS 645

Query: 182 HDVNDARLSMRSIHPQDGDFLSTSSTSESLK 274
            D NDA+L  R++   DGD  ST    +SL+
Sbjct: 646 VDTNDAKLCARAVSNGDGDICSTPPKGDSLE 676


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