BLASTX nr result

ID: Scutellaria23_contig00034368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00034368
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containi...   108   5e-22
emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]   108   6e-22
ref|XP_002509520.1| pentatricopeptide repeat-containing protein,...   106   2e-21
ref|XP_003553254.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15
ref|XP_002512521.1| pentatricopeptide repeat-containing protein,...    87   2e-15

>ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 474

 Score =  108 bits (270), Expect = 5e-22
 Identities = 48/76 (63%), Positives = 66/76 (86%)
 Frame = +1

Query: 1   HEYIKEKGMEVGVILGTALLNMYAKNGALVKARKCFDALKEKNIATWNSMICGLAVHGHA 180
           H +++EKG+EVGVILGTAL++MYAKNGA++ A+K FD + E+N ATWN+MICGLAVHGHA
Sbjct: 250 HVFMEEKGIEVGVILGTALVHMYAKNGAILMAQKLFDTISERNTATWNAMICGLAVHGHA 309

Query: 181 EEAIRFFRMLEEEKVI 228
           +EA+  F  LE+E+++
Sbjct: 310 KEALDRFWKLEKEQIV 325


>emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
          Length = 476

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/76 (63%), Positives = 66/76 (86%)
 Frame = +1

Query: 1   HEYIKEKGMEVGVILGTALLNMYAKNGALVKARKCFDALKEKNIATWNSMICGLAVHGHA 180
           H +++EKG+EVGVILGTAL++MYAKNGA++ A+K FD + E+N ATWN+MICGLAVHGHA
Sbjct: 252 HVFMEEKGIEVGVILGTALVHMYAKNGAILMAQKLFDXISERNTATWNAMICGLAVHGHA 311

Query: 181 EEAIRFFRMLEEEKVI 228
           +EA+  F  LE+E+++
Sbjct: 312 KEALDRFWKLEKEQIV 327


>ref|XP_002509520.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549419|gb|EEF50907.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 413

 Score =  106 bits (265), Expect = 2e-21
 Identities = 46/76 (60%), Positives = 64/76 (84%)
 Frame = +1

Query: 1   HEYIKEKGMEVGVILGTALLNMYAKNGALVKARKCFDALKEKNIATWNSMICGLAVHGHA 180
           H ++ E+G+E+GVILGTAL++MYAKNG ++ ARK FD++ EKN+ATWN+M+CGLA HGHA
Sbjct: 272 HGFMIERGVEIGVILGTALVHMYAKNGKILVARKLFDSMTEKNVATWNAMLCGLASHGHA 331

Query: 181 EEAIRFFRMLEEEKVI 228
           EEA+  F  LE+E ++
Sbjct: 332 EEALSLFWKLEKEHIV 347


>ref|XP_003553254.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 465

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 38/79 (48%), Positives = 59/79 (74%), Gaps = 2/79 (2%)
 Frame = +1

Query: 1   HEYIKEKGMEVG--VILGTALLNMYAKNGALVKARKCFDALKEKNIATWNSMICGLAVHG 174
           HE++K KG+ +G  VILGTAL+ MYAKNG +  AR+ FD + E+N+ TWN+MICGL  +G
Sbjct: 240 HEFMKVKGVGLGEGVILGTALVYMYAKNGEIAMARRLFDEMPERNVVTWNAMICGLGAYG 299

Query: 175 HAEEAIRFFRMLEEEKVIM 231
           + ++A+  F  +++E V++
Sbjct: 300 YVDDALGLFEKMKKEGVVV 318


>ref|XP_002512521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548482|gb|EEF49973.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 422

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 39/75 (52%), Positives = 55/75 (73%)
 Frame = +1

Query: 1   HEYIKEKGMEVGVILGTALLNMYAKNGALVKARKCFDALKEKNIATWNSMICGLAVHGHA 180
           H Y+K+  M +  +LGTAL++MYAK G L  A   F+ +KEK + TWN+MICGLA+HG A
Sbjct: 315 HAYVKKNPMYLDAVLGTALVDMYAKCGRLDMAWDVFETMKEKEVFTWNAMICGLAMHGRA 374

Query: 181 EEAIRFFRMLEEEKV 225
           E+AI+ F  +++EKV
Sbjct: 375 EDAIKLFLKMQKEKV 389


Top