BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00034275
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containi...   137   9e-31
ref|XP_002511573.1| pentatricopeptide repeat-containing protein,...   132   3e-29
ref|NP_177599.1| pentatricopeptide repeat-containing protein [Ar...   113   2e-23
ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arab...   112   4e-23
ref|NP_180932.1| pentatricopeptide repeat-containing protein [Ar...   105   3e-21

>ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic [Vitis vinifera]
           gi|297733984|emb|CBI15231.3| unnamed protein product
           [Vitis vinifera]
          Length = 893

 Score =  137 bits (345), Expect = 9e-31
 Identities = 64/120 (53%), Positives = 92/120 (76%)
 Frame = +2

Query: 2   SKCGDLNSAKTVFDMMPFKDEVSWSSLISGFAQRGHIEEALQLFHNFRLSDVSIDAFTIT 181
           SKCG +  A+ VFDM+P KD+ S SSL+SG+AQ G+IE+AL LFH  R++D+ ID+FT++
Sbjct: 595 SKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVS 654

Query: 182 SILAALAVTSKPDIGSQLHSYTIKVGLESKASIGSSLVMMYSKCGTIGDYDKAFQQIMNP 361
           S++ A+A+ +  DIG+QLH+   K+GL ++ S+GSSLV MYSKCG+I +  K F+QI  P
Sbjct: 655 SVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKP 714



 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 44/107 (41%), Positives = 67/107 (62%)
 Frame = +2

Query: 2   SKCGDLNSAKTVFDMMPFKDEVSWSSLISGFAQRGHIEEALQLFHNFRLSDVSIDAFTIT 181
           SKCG L  + TVF+ MP KD VSW+S+I+GF++  H E+A+QLF    L ++  D  T+T
Sbjct: 494 SKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLT 553

Query: 182 SILAALAVTSKPDIGSQLHSYTIKVGLESKASIGSSLVMMYSKCGTI 322
           + L A +     + G ++H Y ++  +  +  +G +LV MYSKCG I
Sbjct: 554 AALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAI 600



 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 39/117 (33%), Positives = 63/117 (53%)
 Frame = +2

Query: 2   SKCGDLNSAKTVFDMMPFKDEVSWSSLISGFAQRGHIEEALQLFHNFRLSDVSIDAFTIT 181
           +KC D++ A   F  MP ++ VSW+++ISGF Q+     A   F   R     I+ +TIT
Sbjct: 294 AKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTIT 353

Query: 182 SILAALAVTSKPDIGSQLHSYTIKVGLESKASIGSSLVMMYSKCGTIGDYDKAFQQI 352
           S+L A           QLHS+  K G    +++ S+L+ MYSK G +   ++ F+++
Sbjct: 354 SVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREM 410



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 41/118 (34%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
 Frame = +2

Query: 2   SKCGDLNSAKTVF-DMMPFKDEVSWSSLISGFAQRGHIEEALQLFHNFRLSDVSIDAFTI 178
           SK G ++ ++ VF +M   K+   W+ +IS FAQ G    A++LF       +  D F  
Sbjct: 395 SKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCS 454

Query: 179 TSILAALAVTSKPDIGSQLHSYTIKVGLESKASIGSSLVMMYSKCGTIGDYDKAFQQI 352
           +S+L+ +   S   +G  +H Y +K+GL +  S+GSSL  MYSKCG++ +    F+Q+
Sbjct: 455 SSVLSIIDSLS---LGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQM 509



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/117 (26%), Positives = 56/117 (47%)
 Frame = +2

Query: 5   KCGDLNSAKTVFDMMPFKDEVSWSSLISGFAQRGHIEEALQLFHNFRLSDVSIDAFTITS 184
           K   +  A  +FD  P  + +SW+ LISG  Q    E++ + F   R S    + FT  S
Sbjct: 93  KSNSMVHALRLFDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGS 152

Query: 185 ILAALAVTSKPDIGSQLHSYTIKVGLESKASIGSSLVMMYSKCGTIGDYDKAFQQIM 355
           +L+A      P  G  ++S  +K G  S   + + ++ +++K  +  D  + FQ ++
Sbjct: 153 VLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVL 209


>ref|XP_002511573.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550688|gb|EEF52175.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 954

 Score =  132 bits (332), Expect = 3e-29
 Identities = 63/117 (53%), Positives = 90/117 (76%)
 Frame = +2

Query: 2   SKCGDLNSAKTVFDMMPFKDEVSWSSLISGFAQRGHIEEALQLFHNFRLSDVSIDAFTIT 181
           SKCG L SA+ +FD++  KD+VS SSL+SG+AQ G +EEAL LFH   +S+ +ID+F ++
Sbjct: 598 SKCGALESARKMFDLLAVKDQVSCSSLVSGYAQNGWLEEALLLFHEMLISNFTIDSFAVS 657

Query: 182 SILAALAVTSKPDIGSQLHSYTIKVGLESKASIGSSLVMMYSKCGTIGDYDKAFQQI 352
           S+L A+A  ++ D G+QLH++ +K+GL+S  S+GSSLV +YSKCG+I D  KAF QI
Sbjct: 658 SVLGAIAGLNRLDFGTQLHAHLVKLGLDSDVSVGSSLVTVYSKCGSIEDCWKAFNQI 714



 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/114 (35%), Positives = 62/114 (54%)
 Frame = +2

Query: 2   SKCGDLNSAKTVFDMMPFKDEVSWSSLISGFAQRGHIEEALQLFHNFRLSDVSIDAFTIT 181
           SKCG +  +  VF+ +P KD +SW+S+ISGF + GH  +A +L           D  T +
Sbjct: 497 SKCGSIGDSYKVFEQIPVKDNISWTSMISGFTEHGHAYQAFELLRKMLTERSKPDQTTFS 556

Query: 182 SILAALAVTSKPDIGSQLHSYTIKVGLESKASIGSSLVMMYSKCGTIGDYDKAF 343
           +IL+A +       G ++H Y  +  L  +A +G +LV MYSKCG +    K F
Sbjct: 557 AILSAASSIHSLQKGKEIHGYAYRARLGDEALVGGALVNMYSKCGALESARKMF 610



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/117 (29%), Positives = 63/117 (53%)
 Frame = +2

Query: 2   SKCGDLNSAKTVFDMMPFKDEVSWSSLISGFAQRGHIEEALQLFHNFRLSDVSIDAFTIT 181
           +KCGD+  A   F  MP ++ VSW++++SGF +R     AL+ F   R      + FT+T
Sbjct: 297 AKCGDIVDAVKEFSRMPVRNVVSWTAIVSGFIKRDDSISALKFFKEMRKMKEETNKFTVT 356

Query: 182 SILAALAVTSKPDIGSQLHSYTIKVGLESKASIGSSLVMMYSKCGTIGDYDKAFQQI 352
           ++++A A         Q+H + +K G      +G++L+ MY+K   I   +  F+++
Sbjct: 357 TVISACAKPHFIKEAIQIHCWILKTGYYLDPVVGAALINMYAKLHAISSSEMVFREM 413



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
 Frame = +2

Query: 2   SKCGDLNSAKTVF-DMMPFKDEVSWSSLISGFAQRGHIEEALQLFHNFRLSDVSIDAFTI 178
           +K   ++S++ VF +M   K+   W+ +IS FA+    + A+ L        +  D F +
Sbjct: 398 AKLHAISSSEMVFREMEGVKNPGIWTIMISSFAKNQDSQSAIDLLLKLLQQGLRPDKFCL 457

Query: 179 TSILAALAVTSKPDIGSQLHSYTIKVGLESKASIGSSLVMMYSKCGTIGDYDKAFQQI 352
           +S+L+   V     +G ++H Y +K G     S+GSSL  MYSKCG+IGD  K F+QI
Sbjct: 458 SSVLS---VIDSLYLGREIHCYILKTGFVLDLSVGSSLFTMYSKCGSIGDSYKVFEQI 512



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/116 (27%), Positives = 58/116 (50%)
 Frame = +2

Query: 5   KCGDLNSAKTVFDMMPFKDEVSWSSLISGFAQRGHIEEALQLFHNFRLSDVSIDAFTITS 184
           K G L  A  VFD +P K+ +SW+ +ISG+ +    E++ + F     S    +  T   
Sbjct: 97  KSGALFYALKVFDTIPNKNVISWNVIISGYNRNSLFEDSWRFFSMMHFSGFDPNDITYGC 156

Query: 185 ILAALAVTSKPDIGSQLHSYTIKVGLESKASIGSSLVMMYSKCGTIGDYDKAFQQI 352
           +L+A A    P++G Q++S   K G  S   + + ++ + ++ G  GD  + F  +
Sbjct: 157 VLSACAALETPNLGEQVYSLATKNGFYSNGHVRAGMIDLLARNGRFGDALRVFYDV 212



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 36/114 (31%), Positives = 59/114 (51%)
 Frame = +2

Query: 11  GDLNSAKTVFDMMPFKDEVSWSSLISGFAQRGHIEEALQLFHNFRLSDVSIDAFTITSIL 190
           G    A  VF  +  ++ V W+S+ISG  + G    AL +F+      V  ++FT +SIL
Sbjct: 200 GRFGDALRVFYDVSCENVVCWNSIISGAVKSGEYWIALDIFYQMSRRFVVPNSFTFSSIL 259

Query: 191 AALAVTSKPDIGSQLHSYTIKVGLESKASIGSSLVMMYSKCGTIGDYDKAFQQI 352
            A A   + ++G  +  + IK        +G+++V MY+KCG I D  K F ++
Sbjct: 260 TACASLEEVELGKGIQGWVIKC-CAKDIFVGTAIVNMYAKCGDIVDAVKEFSRM 312


>ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g74600, chloroplastic; Flags: Precursor
           gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical
           protein; 84160-81473 [Arabidopsis thaliana]
           gi|332197493|gb|AEE35614.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 895

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/120 (47%), Positives = 83/120 (69%)
 Frame = +2

Query: 2   SKCGDLNSAKTVFDMMPFKDEVSWSSLISGFAQRGHIEEALQLFHNFRLSDVSIDAFTIT 181
           SKCG L  A+ V+D +P  D VS SSLISG++Q G I++   LF +  +S  ++D+F I+
Sbjct: 597 SKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAIS 656

Query: 182 SILAALAVTSKPDIGSQLHSYTIKVGLESKASIGSSLVMMYSKCGTIGDYDKAFQQIMNP 361
           SIL A A++ +  +G+Q+H+Y  K+GL ++ S+GSSL+ MYSK G+I D  KAF QI  P
Sbjct: 657 SILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGP 716



 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/107 (37%), Positives = 63/107 (58%)
 Frame = +2

Query: 2   SKCGDLNSAKTVFDMMPFKDEVSWSSLISGFAQRGHIEEALQLFHNFRLSDVSIDAFTIT 181
           SKCG L  +  +F  +PFKD   W+S+ISGF + G++ EA+ LF        S D  T+ 
Sbjct: 496 SKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLA 555

Query: 182 SILAALAVTSKPDIGSQLHSYTIKVGLESKASIGSSLVMMYSKCGTI 322
           ++L   +       G ++H YT++ G++    +GS+LV MYSKCG++
Sbjct: 556 AVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSL 602



 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 38/117 (32%), Positives = 65/117 (55%)
 Frame = +2

Query: 2   SKCGDLNSAKTVFDMMPFKDEVSWSSLISGFAQRGHIEEALQLFHNFRLSDVSIDAFTIT 181
           +KCG +  A  VF  +P    VSW+ ++SG+ +      AL++F   R S V I+  T+T
Sbjct: 296 AKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVT 355

Query: 182 SILAALAVTSKPDIGSQLHSYTIKVGLESKASIGSSLVMMYSKCGTIGDYDKAFQQI 352
           S+++A    S     SQ+H++  K G    +S+ ++L+ MYSK G I   ++ F+ +
Sbjct: 356 SVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL 412



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
 Frame = +2

Query: 2   SKCGDLNSAKTVF-DMMPFKDEVSWSSLISGFAQRGHIEEALQLFHNFRLSDVSIDAFTI 178
           SK GD++ ++ VF D+   + +   + +I+ F+Q     +A++LF       +  D F++
Sbjct: 397 SKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSV 456

Query: 179 TSILAALAVTSKPDIGSQLHSYTIKVGLESKASIGSSLVMMYSKCGTIGDYDKAFQQI 352
            S+L+ L   +   +G Q+H YT+K GL    ++GSSL  +YSKCG++ +  K FQ I
Sbjct: 457 CSLLSVLDCLN---LGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGI 511


>ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata] gi|297334827|gb|EFH65245.1| hypothetical protein
           ARALYDRAFT_476599 [Arabidopsis lyrata subsp. lyrata]
          Length = 717

 Score =  112 bits (279), Expect = 4e-23
 Identities = 55/120 (45%), Positives = 83/120 (69%)
 Frame = +2

Query: 2   SKCGDLNSAKTVFDMMPFKDEVSWSSLISGFAQRGHIEEALQLFHNFRLSDVSIDAFTIT 181
           SKCG L  A+ V+D +P  D VS SSLISG++Q G +++   LF +  +S  S+D++ I+
Sbjct: 419 SKCGSLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAIS 478

Query: 182 SILAALAVTSKPDIGSQLHSYTIKVGLESKASIGSSLVMMYSKCGTIGDYDKAFQQIMNP 361
           SIL A  ++ + ++G+Q+H+Y  K+GL ++ S+GSSL+ MYSK G+I D  KAF QI  P
Sbjct: 479 SILKAAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGP 538



 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/117 (33%), Positives = 66/117 (56%)
 Frame = +2

Query: 2   SKCGDLNSAKTVFDMMPFKDEVSWSSLISGFAQRGHIEEALQLFHNFRLSDVSIDAFTIT 181
           SKCG L  + ++F  +PFKD   W+S+ISGF + G++ EA+ LF        S D  T+ 
Sbjct: 318 SKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSPDESTLA 377

Query: 182 SILAALAVTSKPDIGSQLHSYTIKVGLESKASIGSSLVMMYSKCGTIGDYDKAFQQI 352
           ++L   +         ++H YT++ G++    +GS+LV  YSKCG++    K + ++
Sbjct: 378 AVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLARKVYDRL 434



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/117 (30%), Positives = 64/117 (54%)
 Frame = +2

Query: 2   SKCGDLNSAKTVFDMMPFKDEVSWSSLISGFAQRGHIEEALQLFHNFRLSDVSIDAFTIT 181
           +KCG +  A+ VF  +     VSW+ ++SG+ +      AL++F   R S V I++ T+T
Sbjct: 118 AKCGHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVT 177

Query: 182 SILAALAVTSKPDIGSQLHSYTIKVGLESKASIGSSLVMMYSKCGTIGDYDKAFQQI 352
           S+++A    S     SQ+H++  K G     S+ ++L+ M SK G I   ++ F+ +
Sbjct: 178 SVISACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDL 234



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/118 (33%), Positives = 70/118 (59%), Gaps = 1/118 (0%)
 Frame = +2

Query: 2   SKCGDLNSAKTVF-DMMPFKDEVSWSSLISGFAQRGHIEEALQLFHNFRLSDVSIDAFTI 178
           SK GD+N ++ VF D+   + +   + +++ F+Q     +A++LF       ++ D F++
Sbjct: 219 SKSGDINLSERVFEDLDDIRRQNIVNVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSV 278

Query: 179 TSILAALAVTSKPDIGSQLHSYTIKVGLESKASIGSSLVMMYSKCGTIGDYDKAFQQI 352
            S+L+ L   +   +G Q+HSYT+K GL    ++GSSL  MYSKCG++ +    FQ+I
Sbjct: 279 CSLLSVLDCLN---LGKQVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEI 333


>ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75101013|sp|P93011.1|PP182_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g33760 gi|1707020|gb|AAC69141.1| hypothetical protein
           [Arabidopsis thaliana] gi|330253787|gb|AEC08881.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 583

 Score =  105 bits (263), Expect = 3e-21
 Identities = 49/117 (41%), Positives = 74/117 (63%)
 Frame = +2

Query: 2   SKCGDLNSAKTVFDMMPFKDEVSWSSLISGFAQRGHIEEALQLFHNFRLSDVSIDAFTIT 181
           SKCGD+  A+ VFD MP K  V+W+SL+SGF Q G  +EA+Q+F+  R S    D+ T  
Sbjct: 153 SKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFV 212

Query: 182 SILAALAVTSKPDIGSQLHSYTIKVGLESKASIGSSLVMMYSKCGTIGDYDKAFQQI 352
           S+L+A A T    +GS +H Y I  GL+    +G++L+ +YS+CG +G   + F ++
Sbjct: 213 SLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKM 269