BLASTX nr result

ID: Scutellaria23_contig00034253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00034253
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago ...   188   4e-46
ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containi...   187   8e-46
ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containi...   186   2e-45
ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containi...   174   5e-42
ref|NP_174603.1| pentatricopeptide repeat-containing protein [Ar...   166   2e-39

>ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
           gi|355494601|gb|AES75804.1| hypothetical protein
           MTR_6g059820 [Medicago truncatula]
          Length = 528

 Score =  188 bits (477), Expect = 4e-46
 Identities = 83/109 (76%), Positives = 99/109 (90%)
 Frame = +3

Query: 3   HGGLVVEGRHYYDMMIKEYGIEPQIEHYGCLIDLLGRSGQFEEAMEVVKGMRIPPDEVVW 182
           HGGLV +G  Y++MMIKEYGIEPQI HYGCLIDLLGR+GQF+EAM+VVKGM + PDEVVW
Sbjct: 358 HGGLVEQGCGYFEMMIKEYGIEPQIAHYGCLIDLLGRAGQFDEAMDVVKGMSMEPDEVVW 417

Query: 183 GSLLNGCKIHRRTDLAEFAVKKLIEINPNNGGYSAMLANLFGEMGKWDD 329
           GSLLNGCK+H RTDLAEFA KKL+EI+P+NGGY  MLAN++G++GKWD+
Sbjct: 418 GSLLNGCKVHGRTDLAEFAAKKLVEIDPHNGGYGTMLANIYGQLGKWDE 466


>ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Glycine max]
          Length = 522

 Score =  187 bits (475), Expect = 8e-46
 Identities = 83/109 (76%), Positives = 100/109 (91%)
 Frame = +3

Query: 3   HGGLVVEGRHYYDMMIKEYGIEPQIEHYGCLIDLLGRSGQFEEAMEVVKGMRIPPDEVVW 182
           HGGLV +G  Y++MM++EYGIEPQIEHYGCLIDLLGR+G+F+EAM+VVKGM + PDEVVW
Sbjct: 352 HGGLVEKGYWYFEMMVQEYGIEPQIEHYGCLIDLLGRAGRFDEAMDVVKGMSMEPDEVVW 411

Query: 183 GSLLNGCKIHRRTDLAEFAVKKLIEINPNNGGYSAMLANLFGEMGKWDD 329
           GSLLNGCK+H RTDLAEFA KKLIEI+P+NGGY  MLAN++GE+GKWD+
Sbjct: 412 GSLLNGCKVHGRTDLAEFAAKKLIEIDPHNGGYRIMLANVYGELGKWDE 460


>ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Vitis vinifera]
          Length = 573

 Score =  186 bits (472), Expect = 2e-45
 Identities = 81/109 (74%), Positives = 99/109 (90%)
 Frame = +3

Query: 3   HGGLVVEGRHYYDMMIKEYGIEPQIEHYGCLIDLLGRSGQFEEAMEVVKGMRIPPDEVVW 182
           HGGLV +G  Y+++M + YGIEPQIEHYGCL+DLLGR+GQFEEAMEVV+GMRI PDEV+W
Sbjct: 410 HGGLVEKGWLYFELMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRGMRIEPDEVIW 469

Query: 183 GSLLNGCKIHRRTDLAEFAVKKLIEINPNNGGYSAMLANLFGEMGKWDD 329
           GSLLNGCKIH  TDLAEF++KKLI+++PNNGGY  MLAN++GE+GKWD+
Sbjct: 470 GSLLNGCKIHGHTDLAEFSIKKLIDMDPNNGGYGIMLANIYGELGKWDE 518


>ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Cucumis sativus]
           gi|449510706|ref|XP_004163739.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g33350-like [Cucumis sativus]
          Length = 563

 Score =  174 bits (442), Expect = 5e-42
 Identities = 78/109 (71%), Positives = 95/109 (87%)
 Frame = +3

Query: 3   HGGLVVEGRHYYDMMIKEYGIEPQIEHYGCLIDLLGRSGQFEEAMEVVKGMRIPPDEVVW 182
           HGGLV +G  Y++MM ++Y IEPQIEH+GCLIDLLGR+G+FEEAMEVV+GM I PDEVVW
Sbjct: 400 HGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVW 459

Query: 183 GSLLNGCKIHRRTDLAEFAVKKLIEINPNNGGYSAMLANLFGEMGKWDD 329
           GSLLN CKIH R+DLAE++VKKLIE++P NGGY  MLAN++ E GKWD+
Sbjct: 460 GSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDE 508


>ref|NP_174603.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75168867|sp|Q9C501.1|PPR70_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g33350 gi|12322383|gb|AAG51215.1|AC051630_12 unknown
           protein; 15445-13829 [Arabidopsis thaliana]
           gi|12322567|gb|AAG51281.1|AC027035_4 PPR-repeat protein,
           putative [Arabidopsis thaliana]
           gi|332193465|gb|AEE31586.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 538

 Score =  166 bits (419), Expect = 2e-39
 Identities = 72/110 (65%), Positives = 91/110 (82%)
 Frame = +3

Query: 3   HGGLVVEGRHYYDMMIKEYGIEPQIEHYGCLIDLLGRSGQFEEAMEVVKGMRIPPDEVVW 182
           HGGLV +GR Y+D+M   +GIEP+IEHYGCLIDLLGR+G+F+EA+EV+  M++  DE +W
Sbjct: 376 HGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIW 435

Query: 183 GSLLNGCKIHRRTDLAEFAVKKLIEINPNNGGYSAMLANLFGEMGKWDDA 332
           GSLLN CKIH   DLAE AVK L+ +NPNNGGY AM+ANL+GEMG W++A
Sbjct: 436 GSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEA 485


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