BLASTX nr result

ID: Scutellaria23_contig00034251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00034251
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29620.3| unnamed protein product [Vitis vinifera]              119   2e-25
ref|XP_002269047.1| PREDICTED: uncharacterized mitochondrial pro...   119   2e-25
ref|XP_002528785.1| RNA binding protein, putative [Ricinus commu...   115   3e-24
ref|NP_199503.1| Intron maturase, type II family protein [Arabid...   114   6e-24
ref|XP_004163762.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   113   2e-23

>emb|CBI29620.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/82 (71%), Positives = 67/82 (81%), Gaps = 1/82 (1%)
 Frame = -1

Query: 246 PRYRNGGFSF-RALMQSTYQFTRRAPDPNDPASLMKEDGVAVCSQMWVENFREPDKTVTN 70
           P  RN GFSF RA   S     RR PDP+DP++LMKEDGVA+CSQMW++NFR PD TVTN
Sbjct: 46  PNPRNNGFSFFRAF--SFAAANRRTPDPDDPSTLMKEDGVALCSQMWIDNFRVPDATVTN 103

Query: 69  LSSYLRRFELWVLAYQKVCADE 4
           L+S+LRRFELWVLAYQKVCADE
Sbjct: 104 LTSFLRRFELWVLAYQKVCADE 125


>ref|XP_002269047.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
           vinifera]
          Length = 749

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/82 (71%), Positives = 67/82 (81%), Gaps = 1/82 (1%)
 Frame = -1

Query: 246 PRYRNGGFSF-RALMQSTYQFTRRAPDPNDPASLMKEDGVAVCSQMWVENFREPDKTVTN 70
           P  RN GFSF RA   S     RR PDP+DP++LMKEDGVA+CSQMW++NFR PD TVTN
Sbjct: 49  PNPRNNGFSFFRAF--SFAAANRRTPDPDDPSTLMKEDGVALCSQMWIDNFRVPDATVTN 106

Query: 69  LSSYLRRFELWVLAYQKVCADE 4
           L+S+LRRFELWVLAYQKVCADE
Sbjct: 107 LTSFLRRFELWVLAYQKVCADE 128


>ref|XP_002528785.1| RNA binding protein, putative [Ricinus communis]
           gi|223531788|gb|EEF33607.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 732

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/78 (71%), Positives = 64/78 (82%)
 Frame = -1

Query: 237 RNGGFSFRALMQSTYQFTRRAPDPNDPASLMKEDGVAVCSQMWVENFREPDKTVTNLSSY 58
           R  GF+   L+  T    RR PDP+DPA+LMKEDGV+VCSQMW+ENFREPD+TV NL+SY
Sbjct: 37  RINGFALFRLLSFT-PMHRRNPDPDDPATLMKEDGVSVCSQMWIENFREPDRTVNNLTSY 95

Query: 57  LRRFELWVLAYQKVCADE 4
           LRRFELWVLAYQKV ADE
Sbjct: 96  LRRFELWVLAYQKVSADE 113


>ref|NP_199503.1| Intron maturase, type II family protein [Arabidopsis thaliana]
           gi|9759434|dbj|BAB10231.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008065|gb|AED95448.1|
           Intron maturase, type II family protein [Arabidopsis
           thaliana]
          Length = 735

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 3/80 (3%)
 Frame = -1

Query: 234 NGGFSFRALMQSTYQFTRR---APDPNDPASLMKEDGVAVCSQMWVENFREPDKTVTNLS 64
           NG   FR L     Q  R+   APDP+DPA+L+KEDGV++CSQMW+ENF+EPDKT TNL+
Sbjct: 38  NGSAIFRYLSYFAPQQRRQQQQAPDPDDPANLLKEDGVSLCSQMWLENFKEPDKTATNLT 97

Query: 63  SYLRRFELWVLAYQKVCADE 4
           SYLRRFELWVLAYQKVC DE
Sbjct: 98  SYLRRFELWVLAYQKVCCDE 117


>ref|XP_004163762.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized mitochondrial
           protein ymf11-like [Cucumis sativus]
          Length = 722

 Score =  113 bits (282), Expect = 2e-23
 Identities = 47/60 (78%), Positives = 58/60 (96%)
 Frame = -1

Query: 183 RRAPDPNDPASLMKEDGVAVCSQMWVENFREPDKTVTNLSSYLRRFELWVLAYQKVCADE 4
           RRAPDPNDP++LMKEDG++ CSQMW+ENFREPD+ V+NL++YL++FELWVLAYQKVCADE
Sbjct: 53  RRAPDPNDPSNLMKEDGISACSQMWIENFREPDRIVSNLTTYLQKFELWVLAYQKVCADE 112


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