BLASTX nr result

ID: Scutellaria23_contig00034184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00034184
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza...   108   6e-22
emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]           108   6e-22
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...   108   6e-22
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   107   1e-21
gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]     107   1e-21

>gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza sativa Japonica Group]
            gi|31429795|gb|AAP51797.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1350

 Score =  108 bits (269), Expect = 6e-22
 Identities = 51/89 (57%), Positives = 70/89 (78%)
 Frame = -1

Query: 267  TVATPLDSSKALQKDDGSPKADISKFRSLIGSLLYLTATRPDIMYAMSFLSRFMQDPSQI 88
            +V TPL  ++  +  DG+ KAD + +RSL+GSLLYLTATRPDIM+A S LSR+M  PSQ+
Sbjct: 1022 SVTTPLLPNEKQKARDGADKADPTIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQL 1081

Query: 87   HYGAAKRVLRYLQGTKNFGIWYESTSDSK 1
            ++ AAKRVLRY++GT ++GIWY+   +SK
Sbjct: 1082 NFTAAKRVLRYIKGTADYGIWYKPVKESK 1110


>emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]
          Length = 1314

 Score =  108 bits (269), Expect = 6e-22
 Identities = 51/89 (57%), Positives = 70/89 (78%)
 Frame = -1

Query: 267  TVATPLDSSKALQKDDGSPKADISKFRSLIGSLLYLTATRPDIMYAMSFLSRFMQDPSQI 88
            +V TPL  ++  +  DG+ KAD + +RSL+GSLLYLTATRPDIM+A S LSR+M  PSQ+
Sbjct: 1088 SVTTPLLPNEKQKARDGADKADPTIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQL 1147

Query: 87   HYGAAKRVLRYLQGTKNFGIWYESTSDSK 1
            ++ AAKRVLRY++GT ++GIWY+   +SK
Sbjct: 1148 NFTAAKRVLRYIKGTADYGIWYKPVKESK 1176


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711922|gb|ABF99717.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score =  108 bits (269), Expect = 6e-22
 Identities = 51/89 (57%), Positives = 70/89 (78%)
 Frame = -1

Query: 267  TVATPLDSSKALQKDDGSPKADISKFRSLIGSLLYLTATRPDIMYAMSFLSRFMQDPSQI 88
            +V TPL  ++  +  DG+ KAD + +RSL+GSLLYLTATRPDIM+A S LSR+M  PSQ+
Sbjct: 1109 SVTTPLLPNEKQKARDGADKADPTIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQL 1168

Query: 87   HYGAAKRVLRYLQGTKNFGIWYESTSDSK 1
            ++ AAKRVLRY++GT ++GIWY+   +SK
Sbjct: 1169 NFTAAKRVLRYIKGTADYGIWYKPVKESK 1197


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  107 bits (266), Expect = 1e-21
 Identities = 49/88 (55%), Positives = 67/88 (76%)
 Frame = -1

Query: 264  VATPLDSSKALQKDDGSPKADISKFRSLIGSLLYLTATRPDIMYAMSFLSRFMQDPSQIH 85
            VATP++S++ LQ +DG+ +AD  +FRSL+G L+YLT TRPDI +A+  +SRFM  PS+ H
Sbjct: 1024 VATPMNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDIAFAVGVISRFMHCPSKQH 1083

Query: 84   YGAAKRVLRYLQGTKNFGIWYESTSDSK 1
             GAAKR+LRY+ GT +FGIWY    + K
Sbjct: 1084 LGAAKRLLRYIAGTYDFGIWYGHVQEFK 1111


>gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1136

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/89 (57%), Positives = 69/89 (77%)
 Frame = -1

Query: 267  TVATPLDSSKALQKDDGSPKADISKFRSLIGSLLYLTATRPDIMYAMSFLSRFMQDPSQI 88
            +V TPL  ++  +  DG+ KAD + +RSL+GSLLYLTATRPDIM+A S LSR+M  PSQ+
Sbjct: 893  SVTTPLLPNEKQKARDGADKADPTIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQL 952

Query: 87   HYGAAKRVLRYLQGTKNFGIWYESTSDSK 1
            ++ AAKRVLRY++GT  +GIWY+   +SK
Sbjct: 953  NFTAAKRVLRYIKGTAYYGIWYKPVKESK 981


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