BLASTX nr result

ID: Scutellaria23_contig00034137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00034137
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002866772.1| predicted protein [Arabidopsis lyrata subsp....    96   2e-21
ref|XP_002327648.1| predicted protein [Populus trichocarpa] gi|2...   101   5e-20
ref|XP_004134850.1| PREDICTED: cell cycle checkpoint protein RAD...    99   5e-19
ref|XP_003629272.1| Cell cycle checkpoint protein RAD17 [Medicag...    98   8e-19
ref|NP_201414.1| cell cycle checkpoint protein RAD17 [Arabidopsi...    90   9e-19

>ref|XP_002866772.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297312607|gb|EFH43031.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 588

 Score = 96.3 bits (238), Expect(2) = 2e-21
 Identities = 44/71 (61%), Positives = 58/71 (81%)
 Frame = -3

Query: 214 SRNKELWVEKYTPSCLEELAVHKKKVEEIKMWFEERLSNTVDNSYSNVILISGQAGVGKS 35
           S+N +LWV+KY P  LEELAVHKKKVE++K+WFEE L  + D   +NV+L++GQAGVGKS
Sbjct: 76  SKNTDLWVDKYRPRTLEELAVHKKKVEQVKLWFEESLDFSKDGLRNNVLLVTGQAGVGKS 135

Query: 34  ATIYAVANHLG 2
           ATI+ +A+ LG
Sbjct: 136 ATIHLIASILG 146



 Score = 30.8 bits (68), Expect(2) = 2e-21
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = -1

Query: 369 SAPTRKNPKRAKRASFSTSCSSPFQYSGASGFDEVKQICMEFDQGFTQFKVPVG 208
           SA T  NP+ +KRA          + SGAS  D+++    +FD+  + FKV  G
Sbjct: 29  SAATTTNPRASKRA----------RLSGASLVDKIRLSFEDFDEALSGFKVSSG 72


>ref|XP_002327648.1| predicted protein [Populus trichocarpa] gi|222836733|gb|EEE75126.1|
           predicted protein [Populus trichocarpa]
          Length = 613

 Score =  101 bits (252), Expect = 5e-20
 Identities = 48/80 (60%), Positives = 59/80 (73%)
 Frame = -3

Query: 241 SRVHTVQGSSRNKELWVEKYTPSCLEELAVHKKKVEEIKMWFEERLSNTVDNSYSNVILI 62
           S+V    G S  KELWV+K+ P  LEELAVHKKKVEE+K WFEERL  T  N  +NV++I
Sbjct: 84  SKVSAGSGRSNVKELWVDKHKPQSLEELAVHKKKVEEVKSWFEERLKTTKGNLINNVVVI 143

Query: 61  SGQAGVGKSATIYAVANHLG 2
           +G+AGVGKS TI  +A+H G
Sbjct: 144 NGKAGVGKSTTIQVIASHFG 163


>ref|XP_004134850.1| PREDICTED: cell cycle checkpoint protein RAD17-like [Cucumis
           sativus] gi|449491306|ref|XP_004158856.1| PREDICTED:
           cell cycle checkpoint protein RAD17-like [Cucumis
           sativus]
          Length = 605

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/79 (58%), Positives = 60/79 (75%)
 Frame = -3

Query: 238 RVHTVQGSSRNKELWVEKYTPSCLEELAVHKKKVEEIKMWFEERLSNTVDNSYSNVILIS 59
           +V    GS    ELW++KY P  LEELAV KKKV+E+K+WFE+RL   +D + SNVILI+
Sbjct: 83  KVSAGSGSVCRNELWIDKYRPHSLEELAVQKKKVDEVKVWFEDRLRTPMDANGSNVILIT 142

Query: 58  GQAGVGKSATIYAVANHLG 2
           G AGVGKSAT++ +A+HLG
Sbjct: 143 GPAGVGKSATVHVIASHLG 161


>ref|XP_003629272.1| Cell cycle checkpoint protein RAD17 [Medicago truncatula]
           gi|355523294|gb|AET03748.1| Cell cycle checkpoint
           protein RAD17 [Medicago truncatula]
          Length = 604

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/82 (57%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
 Frame = -3

Query: 241 SRVHTVQGSSRN--KELWVEKYTPSCLEELAVHKKKVEEIKMWFEERLSNTVDNSYSNVI 68
           S+V    G+ R+  +ELWV+KY P  LEELAVHKKKVEE+K WFEERL  +     +NV+
Sbjct: 77  SKVFAAAGTQRSTAEELWVDKYKPHSLEELAVHKKKVEEVKTWFEERLKPSKGVYRNNVL 136

Query: 67  LISGQAGVGKSATIYAVANHLG 2
           ++SGQAG+GKSA I+ +A+HLG
Sbjct: 137 VVSGQAGIGKSAAIHVIASHLG 158


>ref|NP_201414.1| cell cycle checkpoint protein RAD17 [Arabidopsis thaliana]
           gi|55976607|sp|Q9MBA3.1|RAD17_ARATH RecName: Full=Cell
           cycle checkpoint protein RAD17; Short=AtRAD17; AltName:
           Full=Radiation-sensitive protein 17
           gi|6855472|dbj|BAA90479.1| AtRAD17 [Arabidopsis
           thaliana] gi|10177128|dbj|BAB10418.1| AtRAD17
           [Arabidopsis thaliana] gi|332010780|gb|AED98163.1| cell
           cycle checkpoint protein RAD17 [Arabidopsis thaliana]
          Length = 599

 Score = 89.7 bits (221), Expect(2) = 9e-19
 Identities = 40/71 (56%), Positives = 56/71 (78%)
 Frame = -3

Query: 214 SRNKELWVEKYTPSCLEELAVHKKKVEEIKMWFEERLSNTVDNSYSNVILISGQAGVGKS 35
           S+N +LWV+KY P  LEEL+VHKKKV+E+K+WF+E L    +   +NV+L++GQAGVGKS
Sbjct: 87  SKNTDLWVDKYRPRTLEELSVHKKKVDEVKLWFQESLDFLKNGLRNNVLLVTGQAGVGKS 146

Query: 34  ATIYAVANHLG 2
           ATI+ + + LG
Sbjct: 147 ATIHLITSILG 157



 Score = 28.5 bits (62), Expect(2) = 9e-19
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = -1

Query: 369 SAPTRKNPKRAKRASFSTSCSSPFQYSGASGFDEVKQICMEFDQGFTQFKVPVG 208
           SA T  NP+ +KRA  S + ++      +S  D+++    +FD+  + FKV  G
Sbjct: 33  SAGTATNPRASKRARLSGASAT---QEDSSLVDKIRLSFEDFDEALSGFKVSSG 83


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