BLASTX nr result

ID: Scutellaria23_contig00034049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00034049
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001077989.1| Poly(ADP-ribose) glycohydrolase 1 [Arabidops...    89   4e-16
dbj|BAD95273.1| poly(ADP-ribose) like glycohydrolase [Arabidopsi...    89   4e-16
ref|NP_565730.1| Poly(ADP-ribose) glycohydrolase 1 [Arabidopsis ...    89   4e-16
ref|XP_002881202.1| hypothetical protein ARALYDRAFT_482111 [Arab...    87   1e-15
ref|XP_002533349.1| poly(ADP-ribose) glycohydrolase, putative [R...    87   1e-15

>ref|NP_001077989.1| Poly(ADP-ribose) glycohydrolase 1 [Arabidopsis thaliana]
           gi|330253504|gb|AEC08598.1| Poly(ADP-ribose)
           glycohydrolase 1 [Arabidopsis thaliana]
          Length = 547

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/79 (53%), Positives = 57/79 (72%)
 Frame = -3

Query: 278 RNDFRSIQPFLPLILRSSAVFWPPSVVEALKCLSKGPSQSNVNSGQLFALAIGDLRNSLG 99
           R D  SI P+LPL++RSS+++WPP VVEALK +S+GPS S V+SG++   AI D+R SL 
Sbjct: 4   REDLNSILPYLPLVIRSSSLYWPPRVVEALKAMSEGPSHSQVDSGEVLRQAIFDMRRSLS 63

Query: 98  FYPLNSSASLGVSVFFDDV 42
           F  L  SAS G +  FD++
Sbjct: 64  FSTLEPSASNGYAFLFDEL 82


>dbj|BAD95273.1| poly(ADP-ribose) like glycohydrolase [Arabidopsis thaliana]
          Length = 547

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/79 (53%), Positives = 57/79 (72%)
 Frame = -3

Query: 278 RNDFRSIQPFLPLILRSSAVFWPPSVVEALKCLSKGPSQSNVNSGQLFALAIGDLRNSLG 99
           R D  SI P+LPL++RSS+++WPP VVEALK +S+GPS S V+SG++   AI D+R SL 
Sbjct: 4   REDLNSILPYLPLVIRSSSLYWPPRVVEALKAMSEGPSHSQVDSGEVLRQAIFDMRRSLS 63

Query: 98  FYPLNSSASLGVSVFFDDV 42
           F  L  SAS G +  FD++
Sbjct: 64  FSTLEPSASNGYAFLFDEL 82


>ref|NP_565730.1| Poly(ADP-ribose) glycohydrolase 1 [Arabidopsis thaliana]
           gi|75206423|sp|Q9SKB3.2|PARG1_ARATH RecName:
           Full=Poly(ADP-ribose) glycohydrolase 1
           gi|14701908|gb|AAK72256.1|AF394690_1 poly(ADP-ribose)
           glycohydrolase [Arabidopsis thaliana]
           gi|20197842|gb|AAD32285.2| putative poly(ADP-ribose)
           glycohydrolase [Arabidopsis thaliana]
           gi|330253503|gb|AEC08597.1| Poly(ADP-ribose)
           glycohydrolase 1 [Arabidopsis thaliana]
          Length = 548

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/79 (53%), Positives = 57/79 (72%)
 Frame = -3

Query: 278 RNDFRSIQPFLPLILRSSAVFWPPSVVEALKCLSKGPSQSNVNSGQLFALAIGDLRNSLG 99
           R D  SI P+LPL++RSS+++WPP VVEALK +S+GPS S V+SG++   AI D+R SL 
Sbjct: 4   REDLNSILPYLPLVIRSSSLYWPPRVVEALKAMSEGPSHSQVDSGEVLRQAIFDMRRSLS 63

Query: 98  FYPLNSSASLGVSVFFDDV 42
           F  L  SAS G +  FD++
Sbjct: 64  FSTLEPSASNGYAFLFDEL 82


>ref|XP_002881202.1| hypothetical protein ARALYDRAFT_482111 [Arabidopsis lyrata subsp.
           lyrata] gi|297327041|gb|EFH57461.1| hypothetical protein
           ARALYDRAFT_482111 [Arabidopsis lyrata subsp. lyrata]
          Length = 557

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/79 (51%), Positives = 57/79 (72%)
 Frame = -3

Query: 278 RNDFRSIQPFLPLILRSSAVFWPPSVVEALKCLSKGPSQSNVNSGQLFALAIGDLRNSLG 99
           R D  SI  +LPL++RSS+++WPP VVEALK +S+GPS S V+SG++   AI D+R SL 
Sbjct: 4   REDLNSILSYLPLVIRSSSLYWPPRVVEALKAMSEGPSHSRVDSGEVLWQAISDMRRSLS 63

Query: 98  FYPLNSSASLGVSVFFDDV 42
           F  L  SAS G ++ FD++
Sbjct: 64  FSTLEPSASHGYALLFDEL 82


>ref|XP_002533349.1| poly(ADP-ribose) glycohydrolase, putative [Ricinus communis]
           gi|223526814|gb|EEF29034.1| poly(ADP-ribose)
           glycohydrolase, putative [Ricinus communis]
          Length = 553

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 45/81 (55%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
 Frame = -3

Query: 278 RNDFRSIQPFLPLILRSSAVFWPPSVVEALKCLSKGPSQSNVNSGQLFALAIGDLRNSLG 99
           R D +S+ PFLPL++RSSA+ WP  VVE LK LS+GP  SNVNSG+L   AI DLRNSL 
Sbjct: 4   REDLKSVIPFLPLVIRSSALSWPSQVVETLKELSRGPDFSNVNSGELLFYAISDLRNSLS 63

Query: 98  F--YPLNSSASLGVSVFFDDV 42
              + L  SA  G ++FFD++
Sbjct: 64  LSTHSLAPSAQQGYALFFDEL 84


Top