BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00033943
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33
ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23
ref|XP_002528839.1| pentatricopeptide repeat-containing protein,...   107   1e-21
ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat...   106   2e-21
ref|XP_002461091.1| hypothetical protein SORBIDRAFT_02g040530 [S...   104   7e-21

>ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  145 bits (366), Expect = 3e-33
 Identities = 72/146 (49%), Positives = 100/146 (68%)
 Frame = +3

Query: 3   NLGAKPCGIVLSSILPAFGKLNLLEQGKVMHGFIIKHGLDFDVVVGSALVDMYSSCGLTA 182
           N+G     IV +S+LPA GKL LL+QGK MH F++K GL  DVVVGSAL+ MY++CG   
Sbjct: 327 NVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIK 386

Query: 183 ETEILLSIWSEWDLMIWNSAIAGHASAENYGFGLSIFRRIWKSKLKPSSITLMSILPICT 362
           E E +    S+ D+M+WNS I G+    ++      FRRIW ++ +P+ IT++SILPICT
Sbjct: 387 EAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICT 446

Query: 363 KLGALKQGMEIHCHAIRSSLEMVVSV 440
           ++GAL+QG EIH +  +S L + VSV
Sbjct: 447 QMGALRQGKEIHGYVTKSGLGLNVSV 472



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/138 (29%), Positives = 72/138 (52%)
 Frame = +3

Query: 9   GAKPCGIVLSSILPAFGKLNLLEQGKVMHGFIIKHGLDFDVVVGSALVDMYSSCGLTAET 188
           G  P  ++++SILPA G+L  ++ G  +    ++ G + D+ V +A++DMY  CG   E 
Sbjct: 228 GLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEA 287

Query: 189 EILLSIWSEWDLMIWNSAIAGHASAENYGFGLSIFRRIWKSKLKPSSITLMSILPICTKL 368
             + S     D++ W++ IAG++    Y     ++  +    L  ++I   S+LP   KL
Sbjct: 288 HRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKL 347

Query: 369 GALKQGMEIHCHAIRSSL 422
             LKQG E+H   ++  L
Sbjct: 348 ELLKQGKEMHNFVLKEGL 365



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/124 (31%), Positives = 68/124 (54%)
 Frame = +3

Query: 15  KPCGIVLSSILPAFGKLNLLEQGKVMHGFIIKHGLDFDVVVGSALVDMYSSCGLTAETEI 194
           +P  I + SILP   ++  L QGK +HG++ K GL  +V VG++L+DMYS CG     E 
Sbjct: 432 RPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEK 491

Query: 195 LLSIWSEWDLMIWNSAIAGHASAENYGFGLSIFRRIWKSKLKPSSITLMSILPICTKLGA 374
           +       ++  +N+ I+   S      GL+ + ++ +   +P+ +T +S+L  C+  G 
Sbjct: 492 VFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGL 551

Query: 375 LKQG 386
           L +G
Sbjct: 552 LDRG 555



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 1/146 (0%)
 Frame = +3

Query: 9   GAKPCGIVLSSILPAFGKLNLLEQGKVMHGFIIKHG-LDFDVVVGSALVDMYSSCGLTAE 185
           G  P       +L A   L+ L+ G+ +H  +  HG    +V V  A++DM++ CG   +
Sbjct: 128 GVTPDNYTYPLVLKACSSLHALQLGRWVHETM--HGKTKANVYVQCAVIDMFAKCGSVED 185

Query: 186 TEILLSIWSEWDLMIWNSAIAGHASAENYGFGLSIFRRIWKSKLKPSSITLMSILPICTK 365
              +     + DL  W + I G          L +FR++    L P S+ + SILP C +
Sbjct: 186 ARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGR 245

Query: 366 LGALKQGMEIHCHAIRSSLEMVVSVS 443
           L A+K GM +   A+RS  E  + VS
Sbjct: 246 LEAVKLGMALQVCAVRSGFESDLYVS 271


>ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 692

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/145 (38%), Positives = 84/145 (57%)
 Frame = +3

Query: 9   GAKPCGIVLSSILPAFGKLNLLEQGKVMHGFIIKHGLDFDVVVGSALVDMYSSCGLTAET 188
           G KP    ++SILP+  ++ L   GK +HGF +++G D    +GSA +D YS  G   E 
Sbjct: 343 GLKPNSNTMASILPSLSEMKLFRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREA 402

Query: 189 EILLSIWSEWDLMIWNSAIAGHASAENYGFGLSIFRRIWKSKLKPSSITLMSILPICTKL 368
           EI+L +  + DL+IWNS +AG+A   N    L  FR + K   +P  +T++S+LP+C   
Sbjct: 403 EIVLELMPKRDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHH 462

Query: 369 GALKQGMEIHCHAIRSSLEMVVSVS 443
             L QG E+H + +R  +  V SVS
Sbjct: 463 SRLIQGKELHAYVVRHYMSSVCSVS 487



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/133 (29%), Positives = 75/133 (56%)
 Frame = +3

Query: 27  IVLSSILPAFGKLNLLEQGKVMHGFIIKHGLDFDVVVGSALVDMYSSCGLTAETEILLSI 206
           +++++++PA G+   L  G V+HG  ++ G+  D  V +ALVDMY  CG     + +   
Sbjct: 248 VIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFWS 307

Query: 207 WSEWDLMIWNSAIAGHASAENYGFGLSIFRRIWKSKLKPSSITLMSILPICTKLGALKQG 386
               D++ W++ IAG++        +++F  +  + LKP+S T+ SILP  +++   + G
Sbjct: 308 IGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLFRHG 367

Query: 387 MEIHCHAIRSSLE 425
            EIH  ++R+  +
Sbjct: 368 KEIHGFSLRNGFD 380



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
 Frame = +3

Query: 24  GIVLSSILPAFGKLNLLEQGKVMHGFIIKHGLDFDVVVG---------SALVDMYSSCGL 176
           G     ++ A   L ++EQG++     ++  ++ DVV G          ALVDM++ CG 
Sbjct: 142 GFTYPPVIKACAALGVVEQGRM-----VRENVEADVVRGVVAPSVFVQCALVDMFAKCGC 196

Query: 177 TAETEILLSIWSEWDLMIWNSAIAGHASAENYGFGLSIFRRIWKSKLKPSSITLMSILPI 356
             E   +     E DL  W + I G   A ++   +S+F R+        S+ + +++P 
Sbjct: 197 LGEARSVFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRMRSEGFLADSVIIATVIPA 256

Query: 357 CTKLGALKQGMEIHCHAIR 413
           C +   L+ GM +H  A+R
Sbjct: 257 CGRAKELRTGMVLHGCAVR 275



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/131 (21%), Positives = 67/131 (51%)
 Frame = +3

Query: 6   LGAKPCGIVLSSILPAFGKLNLLEQGKVMHGFIIKHGLDFDVVVGSALVDMYSSCGLTAE 185
           +G +P  + + S+LP     + L QGK +H ++++H +     V +AL+DMY  C    +
Sbjct: 443 VGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVCSVSNALIDMYCKCCCLEK 502

Query: 186 TEILLSIWSEWDLMIWNSAIAGHASAENYGFGLSIFRRIWKSKLKPSSITLMSILPICTK 365
            + +  + ++ D   +N+ I+      +    + +F  + +  + P  +T +++L  C+ 
Sbjct: 503 GKEIFQLVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRDGIAPDKVTFVALLSSCSH 562

Query: 366 LGALKQGMEIH 398
            G +++G+  +
Sbjct: 563 AGLIEKGLHFY 573


>ref|XP_002528839.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531751|gb|EEF33573.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 393

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/137 (37%), Positives = 81/137 (59%)
 Frame = +3

Query: 3   NLGAKPCGIVLSSILPAFGKLNLLEQGKVMHGFIIKHGLDFDVVVGSALVDMYSSCGLTA 182
           N+  KP    LSS+LP F +   +++GK +HG+ I+HGLD DV +GS+L+DMY+ C    
Sbjct: 180 NVNLKPDSFTLSSVLPIFAEYVNVDKGKEIHGYAIRHGLDGDVFIGSSLIDMYAKCTRVE 239

Query: 183 ETEILLSIWSEWDLMIWNSAIAGHASAENYGFGLSIFRRIWKSKLKPSSITLMSILPICT 362
           ++  + S+    D + WNS IAG      +  GL  FR++ K+ +KP  ++  SILP C 
Sbjct: 240 DSLRVFSLLPRRDDISWNSIIAGCVQNSLFDEGLRFFRQMLKANVKPRQVSFSSILPACA 299

Query: 363 KLGALKQGMEIHCHAIR 413
            L  L  G ++H + +R
Sbjct: 300 HLTTLNLGRQLHGYILR 316



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/106 (31%), Positives = 56/106 (52%)
 Frame = +3

Query: 15  KPCGIVLSSILPAFGKLNLLEQGKVMHGFIIKHGLDFDVVVGSALVDMYSSCGLTAETEI 194
           KP  +  SSILPA   L  L  G+ +HG+I++   D +V + S+LVDMY+ CG       
Sbjct: 285 KPRQVSFSSILPACAHLTTLNLGRQLHGYILRVRFDNNVFIASSLVDMYAKCGNVKVARW 344

Query: 195 LLSIWSEWDLMIWNSAIAGHASAENYGFGLSIFRRIWKSKLKPSSI 332
           +     + D++ W + I G+A   +    +S+F ++    +K  +I
Sbjct: 345 IFDKMKQHDMVSWTAMIMGYALHGHARDAISLFEQMEMRGMKLGNI 390


>ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 674

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/133 (39%), Positives = 76/133 (57%)
 Frame = +3

Query: 15  KPCGIVLSSILPAFGKLNLLEQGKVMHGFIIKHGLDFDVVVGSALVDMYSSCGLTAETEI 194
           +P    LSSILP F +   + +GK +HG+ I+HG D DV +GS+L+DMY+ C     +  
Sbjct: 196 RPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVC 255

Query: 195 LLSIWSEWDLMIWNSAIAGHASAENYGFGLSIFRRIWKSKLKPSSITLMSILPICTKLGA 374
              + S  D + WNS IAG      +  GL  FRR+ K K+KP  ++  S++P C  L A
Sbjct: 256 AFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTA 315

Query: 375 LKQGMEIHCHAIR 413
           L  G ++H + IR
Sbjct: 316 LNLGKQLHAYIIR 328



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
 Frame = +3

Query: 15  KPCGIVLSSILPAFGKLNLLEQGKVMHGFIIKHGLDFDVVVGSALVDMYSSCGLTAETEI 194
           KP  +  SS++PA   L  L  GK +H +II+ G D +  + S+L+DMY+ CG       
Sbjct: 297 KPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARY 356

Query: 195 LLS--IWSEWDLMIWNSAIAGHASAENYGFGLSIFRRIWKSKLKPSSITLMSILPICTKL 368
           + +     + D++ W + I G A   +    +S+F  +    +KP  +  M++L  C+  
Sbjct: 357 IFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHA 416

Query: 369 GALKQG 386
           G + +G
Sbjct: 417 GLVDEG 422



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
 Frame = +3

Query: 3   NLGAKPCGIVLSSILPAFGKLNLLEQGKVMHGFIIKHGLDFDVVVGSALVDMYSSCG--- 173
           + G  P   +  S+L A          + +H  +I+ G  FD+   +AL++MYS      
Sbjct: 69  SFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHL 128

Query: 174 ----------------LTAETEILLSIWSEW---DLMIWNSAIAGHASAENYGFGLSIFR 296
                            + + + +  ++      D++ WN+ IAG+A    Y   L++ +
Sbjct: 129 SPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVK 188

Query: 297 RIWKSKLKPSSITLMSILPICTKLGALKQGMEIHCHAIRSSLEMVVSV 440
            + K  L+P S TL SILPI T+   + +G EIH +AIR   +  V +
Sbjct: 189 EMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFI 236


>ref|XP_002461091.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
           gi|241924468|gb|EER97612.1| hypothetical protein
           SORBIDRAFT_02g040530 [Sorghum bicolor]
          Length = 695

 Score =  104 bits (260), Expect = 7e-21
 Identities = 54/145 (37%), Positives = 83/145 (57%)
 Frame = +3

Query: 9   GAKPCGIVLSSILPAFGKLNLLEQGKVMHGFIIKHGLDFDVVVGSALVDMYSSCGLTAET 188
           G KP    L+SILP+  +L L   GK +H F +++GL+    + SAL+D YS  G   E 
Sbjct: 346 GVKPNSTTLASILPSLSELRLFRYGKEIHCFSLRNGLEHSEFLASALIDFYSRQGSIKEA 405

Query: 189 EILLSIWSEWDLMIWNSAIAGHASAENYGFGLSIFRRIWKSKLKPSSITLMSILPICTKL 368
           EI+     + DL++ NS I G+   E+    L + R + K  L+P  +T++S+LP+C + 
Sbjct: 406 EIVFEFTPKNDLVVSNSMIGGYVVNEDSESALRLLRALLKEGLRPDRVTVVSVLPLCNQH 465

Query: 369 GALKQGMEIHCHAIRSSLEMVVSVS 443
             L QG E+H +AIR ++    SVS
Sbjct: 466 SRLLQGKELHAYAIRHNISSCCSVS 490



 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/139 (36%), Positives = 80/139 (57%)
 Frame = +3

Query: 9   GAKPCGIVLSSILPAFGKLNLLEQGKVMHGFIIKHGLDFDVVVGSALVDMYSSCGLTAET 188
           G +P  ++L++++PA GK+  L  G  +HG ++K G+  D  V +ALVDMY  C      
Sbjct: 245 GFRPDSMILATVIPACGKVKELRTGTALHGCVVKCGVGVDTCVLNALVDMYCKCARLDFA 304

Query: 189 EILLSIWSEWDLMIWNSAIAGHASAENYGFGLSIFRRIWKSKLKPSSITLMSILPICTKL 368
             L       D++ W++ IAGH+    Y   +S+F  +  S +KP+S TL SILP  ++L
Sbjct: 305 ASLFWSIDHKDVISWSTIIAGHSQNRRYHVSVSLFSEMVASGVKPNSTTLASILPSLSEL 364

Query: 369 GALKQGMEIHCHAIRSSLE 425
              + G EIHC ++R+ LE
Sbjct: 365 RLFRYGKEIHCFSLRNGLE 383



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
 Frame = +3

Query: 9   GAKPCGIVLSSILPAFGKLNLLEQGKVMHGFIIKHGLDFDVVVGSALVDMYSSCGLTAET 188
           G +P  + + S+LP   + + L QGK +H + I+H +     V +AL DMY  CG     
Sbjct: 447 GLRPDRVTVVSVLPLCNQHSRLLQGKELHAYAIRHNISSCCSVSNALTDMYCKCGCLELA 506

Query: 189 EILLSIWSEWDLMIWN---SAIAGHASAENYGFGLSIFRRIWKSKLKPSSITLMSILPIC 359
             +  + +E + + +N   S++  H  AE   F   + +R     + P  +T +++L  C
Sbjct: 507 FEIFLLMTERNTVTYNTLISSLGKHGHAEQAFFLFDLMKR---DGVSPDKVTFVALLSCC 563

Query: 360 TKLGALKQGM 389
           +  G + +G+
Sbjct: 564 SHEGLIDKGL 573



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
 Frame = +3

Query: 42  ILPAFGKLNLLEQGKVMHGFI---IKHGL-DFDVVVGSALVDMYSSCGLTAETEILLSIW 209
           +L A   L ++EQG+ +   +   I  G+   +V V  ALVDM++ CG   E   +    
Sbjct: 151 VLKACAALGVVEQGRKVQENVEADIARGIAKCNVFVQCALVDMFAKCGCLGEARNVFESM 210

Query: 210 SEWDLMIWNSAIAGHASAENYGFGLSIFRRIWKSKLKPSSITLMSILPICTKLGALKQGM 389
              DL  W + I G     ++   +++ +R+     +P S+ L +++P C K+  L+ G 
Sbjct: 211 EVRDLAAWTAMIGGTVHGGDWLEVMTLLKRMKSEGFRPDSMILATVIPACGKVKELRTGT 270

Query: 390 EIH 398
            +H
Sbjct: 271 ALH 273