BLASTX nr result

ID: Scutellaria23_contig00033933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00033933
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331573.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_004164350.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...    57   1e-06
ref|XP_003616876.1| E3 ubiquitin-protein ligase COP1 [Medicago t...    57   1e-06
ref|XP_002270330.2| PREDICTED: E3 ubiquitin-protein ligase COP1-...    57   2e-06
gb|AAK81856.1|AF394913_1 photoregulatory zinc-finger protein COP...    57   2e-06

>ref|XP_002331573.1| predicted protein [Populus trichocarpa] gi|222873797|gb|EEF10928.1|
           predicted protein [Populus trichocarpa]
          Length = 602

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/56 (60%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
 Frame = +3

Query: 129 MGGDTIPIGALVPTLNSXXXXXXXXXX---VDKDILCPICMQIIKDAFLTECGHSF 287
           MGG++  +GALVP++NS             +DKDILCPICMQIIKDAFLT CGHSF
Sbjct: 1   MGGES-SMGALVPSVNSEATTSKMQPPTEELDKDILCPICMQIIKDAFLTSCGHSF 55


>ref|XP_004164350.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
          Length = 670

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/67 (49%), Positives = 38/67 (56%), Gaps = 14/67 (20%)
 Frame = +3

Query: 129 MGGDTIPIGALVPTLNSXXXXXXXXXX--------------VDKDILCPICMQIIKDAFL 266
           MGG +I  GALVPT+ +                        +DKD+LCPICMQIIKDAFL
Sbjct: 1   MGGGSI--GALVPTVKTEPSTLDSTPSSSPLYRPSHSNTDDLDKDMLCPICMQIIKDAFL 58

Query: 267 TECGHSF 287
           T CGHSF
Sbjct: 59  TTCGHSF 65


>ref|XP_003616876.1| E3 ubiquitin-protein ligase COP1 [Medicago truncatula]
           gi|355518211|gb|AES99834.1| E3 ubiquitin-protein ligase
           COP1 [Medicago truncatula]
          Length = 761

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/52 (53%), Positives = 30/52 (57%)
 Frame = +3

Query: 132 GGDTIPIGALVPTLNSXXXXXXXXXXVDKDILCPICMQIIKDAFLTECGHSF 287
           GGD  PI  +                +DKD LCPICMQIIKDAFLT CGHSF
Sbjct: 34  GGDNFPIATMTE--------------LDKDFLCPICMQIIKDAFLTSCGHSF 71


>ref|XP_002270330.2| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 687

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = +3

Query: 210 VDKDILCPICMQIIKDAFLTECGHSF 287
           VDKD+LCPICMQIIKDAFLT CGHSF
Sbjct: 58  VDKDLLCPICMQIIKDAFLTACGHSF 83


>gb|AAK81856.1|AF394913_1 photoregulatory zinc-finger protein COP1 [Rosa hybrid cultivar]
          Length = 662

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 23/26 (88%), Positives = 25/26 (96%)
 Frame = +3

Query: 210 VDKDILCPICMQIIKDAFLTECGHSF 287
           VDKD+LCPICMQI+KDAFLT CGHSF
Sbjct: 45  VDKDLLCPICMQIVKDAFLTACGHSF 70


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