BLASTX nr result

ID: Scutellaria23_contig00033895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00033895
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog ...    74   9e-12
ref|XP_002511689.1| DNA repair and recombination protein radA, p...    72   6e-11
gb|AFK34970.1| unknown [Medicago truncatula]                           69   5e-10
ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medic...    69   5e-10
ref|XP_002320055.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09

>ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera]
           gi|296089196|emb|CBI38899.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 33/41 (80%), Positives = 39/41 (95%)
 Frame = +1

Query: 1   GNERYAYIDKSPSLRSASAPYAVTGRGIRNSTSNCKRVKLM 123
           G+ERYAYIDKSPSLRSASAPY+VTG+GIR +TS CKR+K+M
Sbjct: 306 GDERYAYIDKSPSLRSASAPYSVTGKGIRTATSKCKRIKIM 346


>ref|XP_002511689.1| DNA repair and recombination protein radA, putative [Ricinus
           communis] gi|223548869|gb|EEF50358.1| DNA repair and
           recombination protein radA, putative [Ricinus communis]
          Length = 346

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/40 (82%), Positives = 38/40 (95%)
 Frame = +1

Query: 4   NERYAYIDKSPSLRSASAPYAVTGRGIRNSTSNCKRVKLM 123
           NERYAYIDKSPSL+SA+APY+VT  GIRNS+SNCKRVK+M
Sbjct: 307 NERYAYIDKSPSLKSATAPYSVTRGGIRNSSSNCKRVKMM 346


>gb|AFK34970.1| unknown [Medicago truncatula]
          Length = 269

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/41 (75%), Positives = 39/41 (95%)
 Frame = +1

Query: 1   GNERYAYIDKSPSLRSASAPYAVTGRGIRNSTSNCKRVKLM 123
           G+ER+AYIDKSPSL+SASAPY+VT RGIRNSTS+ KR+K++
Sbjct: 229 GDERHAYIDKSPSLKSASAPYSVTSRGIRNSTSSSKRIKMV 269


>ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medicago truncatula]
           gi|357477663|ref|XP_003609117.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
           gi|355510139|gb|AES91281.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
           gi|355510172|gb|AES91314.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
          Length = 347

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/41 (75%), Positives = 39/41 (95%)
 Frame = +1

Query: 1   GNERYAYIDKSPSLRSASAPYAVTGRGIRNSTSNCKRVKLM 123
           G+ER+AYIDKSPSL+SASAPY+VT RGIRNSTS+ KR+K++
Sbjct: 307 GDERHAYIDKSPSLKSASAPYSVTSRGIRNSTSSSKRIKMV 347


>ref|XP_002320055.1| predicted protein [Populus trichocarpa] gi|222860828|gb|EEE98370.1|
           predicted protein [Populus trichocarpa]
          Length = 283

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = +1

Query: 4   NERYAYIDKSPSLRSASAPYAVTGRGIRNSTSNCKRVKLM 123
           NERYAYIDKSP LR A+APY+VTGRGIRNS  +CKR KL+
Sbjct: 244 NERYAYIDKSPYLRPAAAPYSVTGRGIRNSAPHCKRSKLV 283


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