BLASTX nr result

ID: Scutellaria23_contig00033871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00033871
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332054.1| predicted protein [Populus trichocarpa] gi|2...   158   4e-37
ref|XP_002512730.1| pentatricopeptide repeat-containing protein,...   153   2e-35
ref|XP_004136099.1| PREDICTED: pentatricopeptide repeat-containi...   147   7e-34
ref|XP_002263537.1| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33
emb|CBI25186.3| unnamed protein product [Vitis vinifera]              146   2e-33

>ref|XP_002332054.1| predicted protein [Populus trichocarpa] gi|222831940|gb|EEE70417.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  158 bits (400), Expect = 4e-37
 Identities = 69/125 (55%), Positives = 97/125 (77%)
 Frame = +2

Query: 23  EAIAFLDSSDIKPDEDFIFSVIWALREEWKLAFLVFKWGDKWDCVVEKSWCLMIWLLGNH 202
           EA+A LD S I+ +++ ++SVIW LREEW+LAFL FKWGDKW CV EK+  LM+W+LGNH
Sbjct: 10  EAMASLDESGIRANQNLVYSVIWELREEWRLAFLAFKWGDKWGCVDEKACELMVWVLGNH 69

Query: 203 KKFSTAWTVIHELYHASMNTHQAMLIMIDRYAAANHPDKAVETFHLMHKFSFSVEQKTYF 382
           +KF+TAW +I +L+ + M+T +AMLIMIDRYAAAN P KA+  F +M KF  + +++ ++
Sbjct: 70  RKFNTAWILIRDLHRSLMSTRKAMLIMIDRYAAANVPGKAIYAFRIMDKFRMTPDEEAFY 129

Query: 383 VFLNI 397
             LN+
Sbjct: 130 FLLNV 134


>ref|XP_002512730.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547741|gb|EEF49233.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 552

 Score =  153 bits (386), Expect = 2e-35
 Identities = 65/129 (50%), Positives = 96/129 (74%)
 Frame = +2

Query: 8   FASGDEAIAFLDSSDIKPDEDFIFSVIWALREEWKLAFLVFKWGDKWDCVVEKSWCLMIW 187
           F    EA+A +D S +K + + ++SVIW LR++WKLAFL FKWG+KW C+ EKS  L++W
Sbjct: 104 FPGEAEAMACIDGSGVKANINLVYSVIWELRKDWKLAFLGFKWGEKWGCIDEKSCELIVW 163

Query: 188 LLGNHKKFSTAWTVIHELYHASMNTHQAMLIMIDRYAAANHPDKAVETFHLMHKFSFSVE 367
           +LGNH+KF+ AW VI +++  SMN  Q MLIMIDRYAAA++P KA+E F++M KF  + +
Sbjct: 164 ILGNHRKFNNAWIVIRDMHQLSMNIQQTMLIMIDRYAAADNPGKAIEVFNIMEKFKMAPD 223

Query: 368 QKTYFVFLN 394
           ++ ++  +N
Sbjct: 224 EEAFYSLMN 232


>ref|XP_004136099.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
           mitochondrial-like [Cucumis sativus]
           gi|449509164|ref|XP_004163514.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g80880,
           mitochondrial-like [Cucumis sativus]
          Length = 547

 Score =  147 bits (372), Expect = 7e-34
 Identities = 66/124 (53%), Positives = 91/124 (73%)
 Frame = +2

Query: 23  EAIAFLDSSDIKPDEDFIFSVIWALREEWKLAFLVFKWGDKWDCVVEKSWCLMIWLLGNH 202
           EA+A LD  D+K D D ++S IW LR++WK + L FKWG+K   + E+   LMIW+LGNH
Sbjct: 101 EAVAALDEFDVKADLDLVYSAIWVLRDDWKSSLLAFKWGEKVGAIDEEICNLMIWVLGNH 160

Query: 203 KKFSTAWTVIHELYHASMNTHQAMLIMIDRYAAANHPDKAVETFHLMHKFSFSVEQKTYF 382
           KKFSTAW++I EL+ + +N+ QAML+MIDRYA AN   KA++TFH+M KF  + +Q+ + 
Sbjct: 161 KKFSTAWSLIRELHGSLLNSMQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPDQEAFH 220

Query: 383 VFLN 394
           V LN
Sbjct: 221 VLLN 224


>ref|XP_002263537.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
           mitochondrial-like [Vitis vinifera]
          Length = 537

 Score =  146 bits (369), Expect = 2e-33
 Identities = 63/127 (49%), Positives = 93/127 (73%)
 Frame = +2

Query: 11  ASGDEAIAFLDSSDIKPDEDFIFSVIWALREEWKLAFLVFKWGDKWDCVVEKSWCLMIWL 190
           +S  E +A LD S ++P+++ ++  IW LRE+W+LA+ VF WG+KW C  E++  L+IW+
Sbjct: 93  SSEAEVMAVLDGSGVEPNQELVYWAIWGLREDWRLAYWVFNWGEKWGCNSERTRGLVIWI 152

Query: 191 LGNHKKFSTAWTVIHELYHASMNTHQAMLIMIDRYAAANHPDKAVETFHLMHKFSFSVEQ 370
           LGN KKF  AW +I EL+ +S++T +AMLIMIDRY AAN P KA++TFH+M KF  S +Q
Sbjct: 153 LGNCKKFGVAWCLIRELHRSSVDTRRAMLIMIDRYTAANDPCKAIKTFHIMEKFRLSPDQ 212

Query: 371 KTYFVFL 391
           + ++  L
Sbjct: 213 EAFYTLL 219


>emb|CBI25186.3| unnamed protein product [Vitis vinifera]
          Length = 548

 Score =  146 bits (369), Expect = 2e-33
 Identities = 63/127 (49%), Positives = 93/127 (73%)
 Frame = +2

Query: 11  ASGDEAIAFLDSSDIKPDEDFIFSVIWALREEWKLAFLVFKWGDKWDCVVEKSWCLMIWL 190
           +S  E +A LD S ++P+++ ++  IW LRE+W+LA+ VF WG+KW C  E++  L+IW+
Sbjct: 93  SSEAEVMAVLDGSGVEPNQELVYWAIWGLREDWRLAYWVFNWGEKWGCNSERTRGLVIWI 152

Query: 191 LGNHKKFSTAWTVIHELYHASMNTHQAMLIMIDRYAAANHPDKAVETFHLMHKFSFSVEQ 370
           LGN KKF  AW +I EL+ +S++T +AMLIMIDRY AAN P KA++TFH+M KF  S +Q
Sbjct: 153 LGNCKKFGVAWCLIRELHRSSVDTRRAMLIMIDRYTAANDPCKAIKTFHIMEKFRLSPDQ 212

Query: 371 KTYFVFL 391
           + ++  L
Sbjct: 213 EAFYTLL 219


Top