BLASTX nr result

ID: Scutellaria23_contig00033791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00033791
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   172   3e-41
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        160   8e-38
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   159   3e-37
emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]   159   3e-37
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   157   6e-37

>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  172 bits (436), Expect = 3e-41
 Identities = 83/160 (51%), Positives = 109/160 (68%), Gaps = 2/160 (1%)
 Frame = +1

Query: 1   GSVTFLMHDGVKRKLEHVRYVPDLKRNLISLGMLDTQGYKFTSEDGKMHITKGTKAVMKG 180
           G+V    +DG++R LE VRY+P+LKRNLISLGMLD  GY F SE   + + +G+  VMKG
Sbjct: 303 GTVRIKHYDGIERVLEDVRYIPELKRNLISLGMLDKSGYTFKSEPNSLRVARGSLTVMKG 362

Query: 181 FKKHDLYYLEGEHIISNECNATKRDC--TKLWHERLGHMSLKGLQELSKKGSFGSDKITN 354
             K+ LY L G+ +        K D   TKLWH+RLGH+S +GLQEL K+G  G+ K+T+
Sbjct: 363 TIKNGLYTLIGQTVTGKVSTVLKEDVGTTKLWHQRLGHISHRGLQELEKQGVLGNYKLTD 422

Query: 355 LEMCENCILGKAKKLSFGTAKHSTKGILEYIHSDLWGPSR 474
           L  CE+C+ GKA ++ F  A H T+  L+YIHSDLWGPSR
Sbjct: 423 LPFCEHCVFGKATRVKFAKAIHETQNQLDYIHSDLWGPSR 462


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  160 bits (406), Expect = 8e-38
 Identities = 80/163 (49%), Positives = 108/163 (66%), Gaps = 5/163 (3%)
 Frame = +1

Query: 1   GSVTFLMHDGVKRKLEHVRYVPDLKRNLISLGMLDTQGYKFTSEDGKMHITKGTKAVMKG 180
           G+V   M DG  R L  VR++P+LKR+LISL  LD +GYK++  DG + +TKG+  VMK 
Sbjct: 342 GTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKA 401

Query: 181 -FKKHDLYYLEGEHIISNECNAT----KRDCTKLWHERLGHMSLKGLQELSKKGSFGSDK 345
             K  +LY+L+G  I+ N    +      D T LWH RLGHMS  GL ELSK+G      
Sbjct: 402 SIKSANLYHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQS 461

Query: 346 ITNLEMCENCILGKAKKLSFGTAKHSTKGILEYIHSDLWGPSR 474
           I+ L+ CE+CI GK K++ F T+ H+T+GIL+Y+HSDLWGP+R
Sbjct: 462 ISKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPAR 504


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  159 bits (401), Expect = 3e-37
 Identities = 78/163 (47%), Positives = 105/163 (64%), Gaps = 5/163 (3%)
 Frame = +1

Query: 1   GSVTFLMHDGVKRKLEHVRYVPDLKRNLISLGMLDTQGYKFTSEDGKMHITKGTKAVMKG 180
           GS+    HDG  R L  VRYVP LK+NLISLG L+++G   T  DG +  T G   ++KG
Sbjct: 267 GSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALESKGLVVTMRDGILKATSGALVMLKG 326

Query: 181 FKKHDLYYLEGEHIISNECNAT---KRDC--TKLWHERLGHMSLKGLQELSKKGSFGSDK 345
             K++LYY +G  ++     AT   K+D   TKLWH RLGH   K LQ  +K+G     K
Sbjct: 327 VMKNNLYYYQGSTVVGTVAAATSSSKKDAEATKLWHMRLGHAGEKSLQIFTKQGLLKGTK 386

Query: 346 ITNLEMCENCILGKAKKLSFGTAKHSTKGILEYIHSDLWGPSR 474
              LE CE+C+LGK +++ FGTA H+TKGIL+Y+HSD+WGP++
Sbjct: 387 ACKLEFCEHCVLGKQRRVKFGTAIHNTKGILDYVHSDVWGPAK 429


>emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]
          Length = 735

 Score =  159 bits (401), Expect = 3e-37
 Identities = 78/160 (48%), Positives = 103/160 (64%), Gaps = 2/160 (1%)
 Frame = +1

Query: 1   GSVTFLMHDGVKRKLEHVRYVPDLKRNLISLGMLDTQGYKFTSEDGKMHITKGTKAVMKG 180
           G+V    +D ++R LE VRY+P+LK+NLISLGMLD   Y F  E   + + +G+  VMKG
Sbjct: 33  GTVRIKHYDSIERVLEDVRYIPELKKNLISLGMLDESRYTFKLEPNSLRVARGSLIVMKG 92

Query: 181 FKKHDLYYLEGEHIISNECNATKRDC--TKLWHERLGHMSLKGLQELSKKGSFGSDKITN 354
             K  LY L G+ + S      K D   TKLWH+RLGH+S +GLQEL K+G  G+ K+TN
Sbjct: 93  TIKIGLYTLIGQTVTSKVSTMLKEDMGTTKLWHQRLGHISHRGLQELEKQGVLGNYKLTN 152

Query: 355 LEMCENCILGKAKKLSFGTAKHSTKGILEYIHSDLWGPSR 474
           L  CE+C+ GK  ++ F    H T+  L+YIHSDLW PSR
Sbjct: 153 LTFCEHCVFGKTTRVKFAKVVHETQNQLDYIHSDLWEPSR 192


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  157 bits (398), Expect = 6e-37
 Identities = 79/163 (48%), Positives = 107/163 (65%), Gaps = 5/163 (3%)
 Frame = +1

Query: 1    GSVTFLMHDGVKRKLEHVRYVPDLKRNLISLGMLDTQGYKFTSEDGKMHITKGTKAVMKG 180
            G+V   M DG  R L  VR++P+LKR+LISL  LD +GYK++  DG + +TKG+  VMK 
Sbjct: 549  GTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKA 608

Query: 181  -FKKHDLYYLEGEHIISNEC----NATKRDCTKLWHERLGHMSLKGLQELSKKGSFGSDK 345
              K  +LY+L G  I+ N      + +  D T LWH RLGHM+  GL ELSK+G      
Sbjct: 609  DIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQS 668

Query: 346  ITNLEMCENCILGKAKKLSFGTAKHSTKGILEYIHSDLWGPSR 474
            I  L+ CE+CI GK K++ F T+ H+T+GIL+Y+HSDLWGP+R
Sbjct: 669  IGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPAR 711


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